Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm28098-201ENSMUST00000191361 699 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.38□□□□□ -1.71
LdlrP35951 Gm44472-201ENSMUST00000204922 943 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Gm29818-201ENSMUST00000218070 165 ntBASIC4.38□□□□□ -1.71
LdlrP35951 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.38□□□□□ -1.71
LdlrP35951 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LdlrP35951 Gm23928-201ENSMUST00000082469 145 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Gm23510-201ENSMUST00000083083 163 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LdlrP35951 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LdlrP35951 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LdlrP35951 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.38□□□□□ -1.71
LdlrP35951 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LdlrP35951 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LdlrP35951 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LdlrP35951 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.37□□□□□ -1.71
LdlrP35951 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm23273-201ENSMUST00000104058 135 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm12053-201ENSMUST00000119022 252 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm11262-201ENSMUST00000119326 833 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm23538-201ENSMUST00000157535 101 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm26024-201ENSMUST00000158657 322 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm26362-201ENSMUST00000158865 315 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm8649-201ENSMUST00000181799 233 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm43601-201ENSMUST00000196294 945 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm44474-201ENSMUST00000196525 127 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm19131-201ENSMUST00000203408 789 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm18488-201ENSMUST00000215082 364 ntBASIC4.37□□□□□ -1.71
LdlrP35951 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LdlrP35951 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm18442-201ENSMUST00000220925 639 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm3338-201ENSMUST00000220982 269 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm6988-201ENSMUST00000222676 375 ntBASIC4.37□□□□□ -1.71
LdlrP35951 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LdlrP35951 Gm23627-201ENSMUST00000082459 107 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm22502-201ENSMUST00000082488 107 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Gm24149-201ENSMUST00000082757 107 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Snord22-201ENSMUST00000083153 126 ntBASIC4.37□□□□□ -1.71
LdlrP35951 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LdlrP35951 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.37□□□□□ -1.71
LdlrP35951 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LdlrP35951 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LdlrP35951 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LdlrP35951 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LdlrP35951 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LdlrP35951 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Gm22758-201ENSMUST00000102275 96 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Gm14656-201ENSMUST00000120342 502 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm12876-201ENSMUST00000120975 408 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm14303-201ENSMUST00000121320 171 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm25294-201ENSMUST00000122791 104 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.36□□□□□ -1.71
LdlrP35951 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Gm16038-201ENSMUST00000159317 193 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm15900-201ENSMUST00000161584 342 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm15796-201ENSMUST00000162135 204 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LdlrP35951 Gm18505-201ENSMUST00000187360 790 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm9775-201ENSMUST00000189402 331 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LdlrP35951 Gm19366-201ENSMUST00000206996 156 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm44959-201ENSMUST00000209127 231 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm45392-201ENSMUST00000210441 214 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LdlrP35951 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LdlrP35951 Gm26439-201ENSMUST00000082592 106 ntBASIC4.36□□□□□ -1.71
LdlrP35951 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
LdlrP35951 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LdlrP35951 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms