Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.82□□□□□ -1.8
Cbx4O55187 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm13567-201ENSMUST00000118026 247 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm11420-201ENSMUST00000120047 402 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm13574-201ENSMUST00000120482 394 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm14875-201ENSMUST00000120881 319 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm11645-201ENSMUST00000121589 649 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm22199-201ENSMUST00000122660 126 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm22986-201ENSMUST00000122753 130 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.82□□□□□ -1.8
Cbx4O55187 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm25883-201ENSMUST00000157781 271 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm26988-201ENSMUST00000183296 945 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm27539-201ENSMUST00000184971 224 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm4854-201ENSMUST00000185902 574 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm5731-201ENSMUST00000190969 481 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm19418-201ENSMUST00000197436 580 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm3010-201ENSMUST00000198805 448 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm43441-201ENSMUST00000201458 205 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm43440-201ENSMUST00000201957 729 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm43954-201ENSMUST00000204634 544 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm45048-201ENSMUST00000207058 429 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm8745-201ENSMUST00000207846 782 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm18194-201ENSMUST00000210455 481 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm45735-201ENSMUST00000212779 319 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Gm20304-201ENSMUST00000218168 444 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Cbx4O55187 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cbx4O55187 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.82□□□□□ -1.8
Cbx4O55187 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.82□□□□□ -1.8
Cbx4O55187 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Cbx4O55187 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cbx4O55187 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm23133-201ENSMUST00000104255 135 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm14816-201ENSMUST00000117174 294 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm13831-201ENSMUST00000118764 302 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm15377-201ENSMUST00000119594 246 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm14815-201ENSMUST00000120060 488 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm13751-201ENSMUST00000120280 752 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm14037-201ENSMUST00000120576 313 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm13557-201ENSMUST00000120771 382 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm14559-201ENSMUST00000121745 496 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm23753-201ENSMUST00000157575 149 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm23591-201ENSMUST00000157663 286 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm24014-201ENSMUST00000157728 157 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm22584-201ENSMUST00000177935 92 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm28471-201ENSMUST00000185994 615 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm28666-201ENSMUST00000186649 274 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm28255-201ENSMUST00000187101 694 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm28724-202ENSMUST00000194218 295 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm4248-201ENSMUST00000196905 316 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm43494-201ENSMUST00000197672 388 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.81□□□□□ -1.8
Cbx4O55187 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.81□□□□□ -1.8
Cbx4O55187 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm18160-201ENSMUST00000214279 827 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Gm18703-201ENSMUST00000215318 333 ntBASIC3.81□□□□□ -1.8
Cbx4O55187 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cbx4O55187 AC157017.1-201ENSMUST00000220148 364 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms