Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm14627-201ENSMUST00000118931 567 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm27592-201ENSMUST00000157729 126 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm22174-201ENSMUST00000175050 125 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm22692-201ENSMUST00000175055 125 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm27634-201ENSMUST00000175060 126 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm22460-201ENSMUST00000175269 124 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm25535-201ENSMUST00000175364 125 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm24365-201ENSMUST00000175384 125 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm44310-201ENSMUST00000175424 126 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm22639-201ENSMUST00000175591 125 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm24979-201ENSMUST00000178626 126 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm7909-201ENSMUST00000182688 614 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm27743-201ENSMUST00000185136 126 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm45226-201ENSMUST00000206602 288 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm18903-201ENSMUST00000215343 480 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.55□□□□□ -1.84
Srp54bE9PXC0 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm23256-201ENSMUST00000102235 110 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm26140-201ENSMUST00000103807 110 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm7429-201ENSMUST00000118664 348 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm6797-201ENSMUST00000119440 512 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm25519-201ENSMUST00000158392 127 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm22908-201ENSMUST00000177620 110 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm28591-201ENSMUST00000185259 183 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm28148-201ENSMUST00000186924 697 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm42828-201ENSMUST00000199669 469 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm17893-201ENSMUST00000203017 770 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm44727-201ENSMUST00000204225 451 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm22739-201ENSMUST00000083437 160 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm25630-201ENSMUST00000084000 162 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Srp54bE9PXC0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm23530-201ENSMUST00000104564 137 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm14825-201ENSMUST00000113538 701 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm11923-201ENSMUST00000118135 508 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm13511-201ENSMUST00000121167 363 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm15157-201ENSMUST00000121852 702 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm16363-201ENSMUST00000132460 877 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm25979-201ENSMUST00000157177 138 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Mir3112-201ENSMUST00000175431 82 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm27428-201ENSMUST00000184289 110 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm28155-201ENSMUST00000191066 151 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm5175-202ENSMUST00000219699 529 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm2710-201ENSMUST00000073196 603 ntBASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Srp54bE9PXC0 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms