Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm12268-201ENSMUST00000118398 442 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm14848-201ENSMUST00000121850 467 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm22841-201ENSMUST00000158443 62 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm23186-201ENSMUST00000180078 107 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm29950-201ENSMUST00000195273 237 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm44634-201ENSMUST00000206119 152 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 AF357428-201ENSMUST00000083815 69 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm23530-201ENSMUST00000104564 137 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm14677-201ENSMUST00000117866 486 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm22310-201ENSMUST00000157509 116 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm25037-201ENSMUST00000175418 110 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm5527-201ENSMUST00000179821 642 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm29334-201ENSMUST00000190334 357 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Gm24446-201ENSMUST00000083982 156 ntBASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Shank1D3YZU1 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm15108-201ENSMUST00000116160 803 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm11704-201ENSMUST00000120031 214 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm22733-201ENSMUST00000158094 91 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm5983-201ENSMUST00000197739 770 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm29884-201ENSMUST00000218403 453 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Shank1D3YZU1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.22□□□□□ -1.89
Shank1D3YZU1 Gm12891-201ENSMUST00000119358 240 ntBASIC3.22□□□□□ -1.89
Shank1D3YZU1 Gm11448-201ENSMUST00000120427 450 ntBASIC3.22□□□□□ -1.89
Shank1D3YZU1 Gm22390-201ENSMUST00000157588 325 ntBASIC3.22□□□□□ -1.89
Shank1D3YZU1 Gm27592-201ENSMUST00000157729 126 ntBASIC3.22□□□□□ -1.89
Shank1D3YZU1 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms