Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Mir878-201ENSMUST00000104680 78 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15176-201ENSMUST00000117734 135 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12025-201ENSMUST00000117768 144 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm2066-201ENSMUST00000118046 389 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm2288-201ENSMUST00000118560 638 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm2318-201ENSMUST00000119623 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14159-201ENSMUST00000119832 451 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15014-201ENSMUST00000120742 258 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm2005-201ENSMUST00000120759 542 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15142-201ENSMUST00000121013 856 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm11819-201ENSMUST00000122192 372 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22839-201ENSMUST00000158436 304 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm3123-201ENSMUST00000163480 480 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7438-201ENSMUST00000177664 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7408-201ENSMUST00000178014 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7386-201ENSMUST00000178020 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm3657-201ENSMUST00000178170 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7415-201ENSMUST00000178205 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7398-201ENSMUST00000178589 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7391-201ENSMUST00000178680 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7375-201ENSMUST00000179232 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm3681-201ENSMUST00000179940 639 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Mir6383-201ENSMUST00000184545 116 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm27163-201ENSMUST00000184767 409 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28650-201ENSMUST00000188413 411 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm29389-201ENSMUST00000191562 352 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm18956-201ENSMUST00000192857 480 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm18551-201ENSMUST00000195594 642 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm18433-202ENSMUST00000195682 196 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45209-201ENSMUST00000207122 353 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22493-201ENSMUST00000104494 132 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12954-201ENSMUST00000118610 611 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12881-201ENSMUST00000121191 203 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm8840-201ENSMUST00000122454 386 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15274-201ENSMUST00000131442 291 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm21979-201ENSMUST00000139887 291 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15259-201ENSMUST00000151262 291 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms