Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm15333-201ENSMUST00000118825 364 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm13873-201ENSMUST00000119208 427 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm15103-201ENSMUST00000119893 871 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm13537-201ENSMUST00000120467 267 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm2005-201ENSMUST00000120759 542 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm12650-201ENSMUST00000121966 258 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm10067-201ENSMUST00000179462 348 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm26960-201ENSMUST00000182263 412 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm27161-201ENSMUST00000183960 562 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm27568-201ENSMUST00000184220 99 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm27428-201ENSMUST00000184289 110 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm29259-201ENSMUST00000186396 694 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm29576-201ENSMUST00000188020 678 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm29330-201ENSMUST00000190032 699 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm28354-201ENSMUST00000190904 678 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm28098-201ENSMUST00000191361 699 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm20203-201ENSMUST00000192352 332 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm37001-201ENSMUST00000193377 190 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm37616-201ENSMUST00000193974 322 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm30341-201ENSMUST00000194363 289 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm43853-201ENSMUST00000197162 301 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm43393-201ENSMUST00000200147 194 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm44099-201ENSMUST00000203299 112 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm7468-201ENSMUST00000203900 652 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Mecom-201ENSMUST00000061088 348 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Gm23297-201ENSMUST00000083184 127 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Mir17-201ENSMUST00000083574 84 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-3A0A075B648 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm13614-201ENSMUST00000117306 503 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm15014-201ENSMUST00000120742 258 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm14915-201ENSMUST00000120747 204 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm11582-201ENSMUST00000121041 236 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm24213-201ENSMUST00000158255 258 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm16111-201ENSMUST00000162128 285 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm27903-201ENSMUST00000175482 126 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm25470-201ENSMUST00000175576 111 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm26866-201ENSMUST00000180414 802 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Mir6383-201ENSMUST00000184545 116 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm4854-201ENSMUST00000185902 574 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm19641-201ENSMUST00000188432 417 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm38075-201ENSMUST00000191979 920 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm6510-201ENSMUST00000195916 574 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm43104-201ENSMUST00000197234 311 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm17911-201ENSMUST00000210806 877 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm45327-201ENSMUST00000211612 565 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Gm40692-201ENSMUST00000220411 491 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav12-3A0A075B648 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms