Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm29339-201ENSMUST00000189613 696 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm28159-201ENSMUST00000190296 696 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm29366-201ENSMUST00000190481 699 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm20811-201ENSMUST00000190500 553 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm5731-201ENSMUST00000190969 481 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm29407-201ENSMUST00000191468 696 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm37946-201ENSMUST00000192064 347 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm37433-201ENSMUST00000192695 678 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm37441-201ENSMUST00000194430 678 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm38107-201ENSMUST00000194873 696 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm43494-201ENSMUST00000197672 388 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm18602-201ENSMUST00000209794 851 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm2710-201ENSMUST00000073196 603 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm22293-201ENSMUST00000083314 109 ntBASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Trav1A0A075B5Z4 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Mir190b-201ENSMUST00000104803 80 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Mir1198-201ENSMUST00000116995 121 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm15659-201ENSMUST00000118881 341 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm14559-201ENSMUST00000121745 496 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm25606-201ENSMUST00000158363 95 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm28113-201ENSMUST00000188280 229 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm28925-201ENSMUST00000188586 168 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm29389-201ENSMUST00000191562 352 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm44927-201ENSMUST00000207573 716 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm45658-201ENSMUST00000209197 580 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm7380-201ENSMUST00000211599 466 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm18116-201ENSMUST00000220920 537 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Mir101b-201ENSMUST00000083622 97 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trav1A0A075B5Z4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm23691-201ENSMUST00000101878 107 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm26002-201ENSMUST00000101915 107 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm14901-201ENSMUST00000119001 283 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm11943-201ENSMUST00000119473 327 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm15038-201ENSMUST00000122144 296 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm13092-201ENSMUST00000136346 260 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm25058-201ENSMUST00000157365 128 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm22789-201ENSMUST00000157884 130 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Mir1934-201ENSMUST00000158127 83 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm22501-201ENSMUST00000158981 127 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm7346-201ENSMUST00000169661 476 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Mir5710-201ENSMUST00000176884 69 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm22307-201ENSMUST00000180019 107 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm27308-201ENSMUST00000184807 233 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm28560-201ENSMUST00000186091 315 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm18448-201ENSMUST00000186286 599 ntBASIC3.04□□□□□ -1.92
Trav1A0A075B5Z4 Gm28334-201ENSMUST00000186653 315 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms