Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm13588-201ENSMUST00000120026 135 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm27898-201ENSMUST00000183987 80 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm27786-201ENSMUST00000184337 70 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm28625-201ENSMUST00000188309 205 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm43804-201ENSMUST00000198280 456 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm43925-201ENSMUST00000203498 206 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.15□□□□□ -1.91
Scn11aQ9R053 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Scn11aQ9R053 Gm37602-201ENSMUST00000195187 3310 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm11866-201ENSMUST00000120209 335 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm22947-201ENSMUST00000158559 91 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm5263-201ENSMUST00000163646 601 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm38283-201ENSMUST00000193041 695 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm43476-201ENSMUST00000197873 405 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm20074-201ENSMUST00000208144 484 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 Gm45382-201ENSMUST00000210607 151 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.14□□□□□ -1.91
Scn11aQ9R053 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Scn11aQ9R053 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm7421-201ENSMUST00000119298 639 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm7365-201ENSMUST00000120877 639 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm19427-201ENSMUST00000183619 208 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm28146-201ENSMUST00000185517 701 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Gm45474-201ENSMUST00000209471 408 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.13□□□□□ -1.91
Scn11aQ9R053 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Scn11aQ9R053 Mir693-201ENSMUST00000102187 89 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm25938-201ENSMUST00000104139 166 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm13880-201ENSMUST00000118421 474 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm15019-201ENSMUST00000120148 434 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm9892-201ENSMUST00000182415 992 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm3852-201ENSMUST00000182781 264 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm25130-201ENSMUST00000082650 156 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm24736-201ENSMUST00000158862 130 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm29335-201ENSMUST00000188361 459 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Gm28466-201ENSMUST00000190678 659 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Mir322-201ENSMUST00000083484 95 ntBASIC3.12□□□□□ -1.91
Scn11aQ9R053 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn11aQ9R053 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm12492-201ENSMUST00000117665 564 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm8338-201ENSMUST00000163928 363 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm26622-201ENSMUST00000180520 298 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn11aQ9R053 Mir6925-201ENSMUST00000197857 70 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm43427-201ENSMUST00000198188 331 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC3.11□□□□□ -1.91
Scn11aQ9R053 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn11aQ9R053 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn11aQ9R053 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.11□□□□□ -1.91
Scn11aQ9R053 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm22534-201ENSMUST00000158173 104 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm38076-201ENSMUST00000193889 450 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm38008-201ENSMUST00000195333 518 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm9818-201ENSMUST00000050900 255 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms