Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm25605-201ENSMUST00000158364 124 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm3104-201ENSMUST00000171004 473 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.06□□□□□ -2.08
Six6Q9QZ28 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm18327-201ENSMUST00000202426 830 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm43991-201ENSMUST00000203751 274 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm44964-201ENSMUST00000207011 273 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm45513-201ENSMUST00000210228 376 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm8681-201ENSMUST00000219115 618 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Six6Q9QZ28 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Six6Q9QZ28 Gm9174-201ENSMUST00000078149 255 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Six6Q9QZ28 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Six6Q9QZ28 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.06□□□□□ -2.08
Six6Q9QZ28 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm12427-201ENSMUST00000117719 302 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm23667-201ENSMUST00000157466 120 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm22083-201ENSMUST00000157586 102 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm3852-201ENSMUST00000182781 264 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm43932-201ENSMUST00000204499 52 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm45192-201ENSMUST00000206749 283 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm20074-201ENSMUST00000208144 484 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm45879-201ENSMUST00000212521 392 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Olfr936-202ENSMUST00000216912 937 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.05□□□□□ -2.08
Six6Q9QZ28 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Six6Q9QZ28 Gm25272-201ENSMUST00000104293 128 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm14537-201ENSMUST00000117464 599 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm13504-201ENSMUST00000117490 316 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm14652-201ENSMUST00000118479 235 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm11625-201ENSMUST00000119535 296 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm14534-201ENSMUST00000120045 357 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm7071-201ENSMUST00000120458 462 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm22726-201ENSMUST00000158089 179 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm24210-201ENSMUST00000158263 133 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm15946-201ENSMUST00000160654 423 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm37807-201ENSMUST00000194310 190 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm3010-201ENSMUST00000198805 448 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm19244-201ENSMUST00000204340 253 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm44594-201ENSMUST00000208982 407 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm19599-201ENSMUST00000218898 358 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm9628-201ENSMUST00000222169 725 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm46389-201ENSMUST00000223199 392 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm23925-201ENSMUST00000082471 132 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Six6Q9QZ28 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.04□□□□□ -2.08
Six6Q9QZ28 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm25727-201ENSMUST00000104522 131 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.03□□□□□ -2.08
Six6Q9QZ28 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC2.03□□□□□ -2.08
Six6Q9QZ28 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm6788-201ENSMUST00000166459 270 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm25817-201ENSMUST00000177758 121 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm24766-201ENSMUST00000179182 121 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Gm45420-201ENSMUST00000211243 425 ntBASIC2.03□□□□□ -2.08
Six6Q9QZ28 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Six6Q9QZ28 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Six6Q9QZ28 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Six6Q9QZ28 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms