Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm22148-201ENSMUST00000104445 107 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm15332-201ENSMUST00000118386 357 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm15936-201ENSMUST00000118706 460 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm14018-201ENSMUST00000119042 455 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm7670-201ENSMUST00000121272 641 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm14402-201ENSMUST00000122217 508 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm22223-201ENSMUST00000157360 125 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm22476-201ENSMUST00000158902 100 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm3076-201ENSMUST00000161613 451 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm38076-201ENSMUST00000193889 450 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm43309-201ENSMUST00000200837 458 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm44425-201ENSMUST00000203739 429 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm11360-201ENSMUST00000221898 262 ntBASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Msh5Q9QUM7 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 AC152159.1-201ENSMUST00000226719 2769 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm13922-201ENSMUST00000119505 156 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm22428-201ENSMUST00000158554 132 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm27761-201ENSMUST00000184091 131 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm2607-201ENSMUST00000212389 627 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 AC120540.2-201ENSMUST00000221716 387 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm2614-201ENSMUST00000223227 403 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Naip3-201ENSMUST00000118082 4208 ntBASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Msh5Q9QUM7 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm23593-201ENSMUST00000104309 120 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm14810-201ENSMUST00000121628 486 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm23536-201ENSMUST00000157541 134 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm2862-201ENSMUST00000161524 328 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm29031-201ENSMUST00000185316 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm29000-201ENSMUST00000185444 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm28204-201ENSMUST00000185934 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm28290-201ENSMUST00000186505 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm28161-201ENSMUST00000186669 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm28749-209ENSMUST00000189599 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm33163-201ENSMUST00000194504 614 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm44391-201ENSMUST00000198490 93 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm44182-201ENSMUST00000204052 115 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm44030-201ENSMUST00000204865 432 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh5Q9QUM7 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms