Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Snord22-201ENSMUST00000083153 126 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm10780-201ENSMUST00000099459 285 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm23577-201ENSMUST00000103950 110 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm22072-201ENSMUST00000116850 121 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm2066-201ENSMUST00000118046 389 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm14731-201ENSMUST00000119216 376 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm2318-201ENSMUST00000119623 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm2005-201ENSMUST00000120759 542 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm9001-201ENSMUST00000121642 399 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm14129-201ENSMUST00000122436 291 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm24850-201ENSMUST00000158029 119 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm8338-201ENSMUST00000163928 363 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7438-201ENSMUST00000177664 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7408-201ENSMUST00000178014 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7386-201ENSMUST00000178020 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm3657-201ENSMUST00000178170 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7415-201ENSMUST00000178205 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7398-201ENSMUST00000178589 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7391-201ENSMUST00000178680 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm26365-201ENSMUST00000179177 94 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm7375-201ENSMUST00000179232 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm3681-201ENSMUST00000179940 639 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm28650-201ENSMUST00000188413 411 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm37001-201ENSMUST00000193377 190 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm37288-201ENSMUST00000193963 334 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm4921-201ENSMUST00000219804 992 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 AC144798.1-201ENSMUST00000228120 391 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm23738-201ENSMUST00000082828 171 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trem1Q9JKE2 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Mir761-201ENSMUST00000103245 76 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm23178-201ENSMUST00000116782 95 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm26099-201ENSMUST00000157248 109 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm25470-201ENSMUST00000175576 111 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm9632-201ENSMUST00000195934 643 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm45072-201ENSMUST00000208673 929 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm22043-201ENSMUST00000082993 158 ntBASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Trem1Q9JKE2 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm14282-201ENSMUST00000119484 240 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm15480-201ENSMUST00000120442 519 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms