Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm19126-201ENSMUST00000207896 509 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Gm4928-201ENSMUST00000219622 850 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Gm9845-201ENSMUST00000056409 598 ntBASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Lima1Q9ERG0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Lima1Q9ERG0 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
Lima1Q9ERG0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm14518-201ENSMUST00000117351 542 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm12495-201ENSMUST00000119750 447 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm14008-201ENSMUST00000120483 274 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm11582-201ENSMUST00000121041 236 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm12693-201ENSMUST00000121965 483 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm16373-201ENSMUST00000129517 303 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm22521-201ENSMUST00000158272 134 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm24314-201ENSMUST00000158274 123 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm24736-201ENSMUST00000158862 130 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm28552-201ENSMUST00000190725 388 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm37007-201ENSMUST00000194234 319 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm45273-201ENSMUST00000211559 281 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm9765-201ENSMUST00000043170 321 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm5265-201ENSMUST00000076828 342 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Olfr1160-201ENSMUST00000099839 960 ntBASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Lima1Q9ERG0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Mir592-201ENSMUST00000102113 96 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm9009-201ENSMUST00000117321 326 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm14981-201ENSMUST00000117325 943 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm11576-201ENSMUST00000117433 417 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm16363-201ENSMUST00000132460 877 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm27783-201ENSMUST00000183534 105 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Mir6408-201ENSMUST00000183643 91 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm29259-201ENSMUST00000186396 694 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm19030-201ENSMUST00000194947 552 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm37817-201ENSMUST00000195276 434 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm43489-201ENSMUST00000196810 993 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm44718-201ENSMUST00000206886 359 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm26129-201ENSMUST00000082719 107 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm25739-201ENSMUST00000082886 107 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Lima1Q9ERG0 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Mir499-201ENSMUST00000102357 79 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm15382-201ENSMUST00000118011 537 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms