Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm22740-201ENSMUST00000083439 109 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 BC051076-202ENSMUST00000199477 2868 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm23709-201ENSMUST00000104364 130 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm15426-201ENSMUST00000117823 556 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm13550-201ENSMUST00000118185 525 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm14883-201ENSMUST00000120179 157 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm11430-201ENSMUST00000121317 217 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm14916-201ENSMUST00000121904 204 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm26276-201ENSMUST00000157099 109 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm25335-201ENSMUST00000158043 103 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm26468-201ENSMUST00000158644 106 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm15900-201ENSMUST00000161584 342 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm3191-201ENSMUST00000167139 346 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Mir7081-201ENSMUST00000184490 75 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm28700-201ENSMUST00000187614 579 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm28069-201ENSMUST00000189926 214 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm29490-201ENSMUST00000190923 342 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm42453-201ENSMUST00000200477 409 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm19126-201ENSMUST00000207896 509 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm23404-201ENSMUST00000082543 97 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm24147-201ENSMUST00000082763 144 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.27□□□□□ -1.57
Upf1Q9EPU0 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Upf1Q9EPU0 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Snord70-201ENSMUST00000104157 87 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm26418-201ENSMUST00000104275 137 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm22032-201ENSMUST00000116946 116 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm14681-201ENSMUST00000118047 411 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm13082-201ENSMUST00000118877 561 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm11699-201ENSMUST00000119016 401 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm12787-201ENSMUST00000119234 396 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm25827-201ENSMUST00000157089 107 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm24737-201ENSMUST00000158861 100 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm20543-201ENSMUST00000174200 726 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm24518-201ENSMUST00000180275 94 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm27385-201ENSMUST00000184747 104 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm28299-201ENSMUST00000189908 339 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm9722-201ENSMUST00000194568 802 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm43853-201ENSMUST00000197162 301 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm7468-201ENSMUST00000203900 652 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm35876-201ENSMUST00000205044 459 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm46190-201ENSMUST00000219650 427 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm20102-201ENSMUST00000222445 220 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf1Q9EPU0 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms