Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm13862-201ENSMUST00000121220 197 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm24138-201ENSMUST00000157572 114 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm27733-201ENSMUST00000184803 68 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm18403-201ENSMUST00000192907 529 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm4945-201ENSMUST00000075152 453 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Hmgn3Q9DCB1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm22488-201ENSMUST00000116811 127 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm12787-201ENSMUST00000119234 396 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm11881-201ENSMUST00000119408 572 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm24734-201ENSMUST00000158860 262 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm17187-201ENSMUST00000164622 410 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm17183-201ENSMUST00000171170 493 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm28113-201ENSMUST00000188280 229 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm19193-201ENSMUST00000190263 590 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm18843-201ENSMUST00000194982 719 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm45860-201ENSMUST00000212700 334 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm30534-201ENSMUST00000217928 207 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gm23677-201ENSMUST00000083156 104 ntBASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Hmgn3Q9DCB1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm24127-201ENSMUST00000104110 130 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm24403-201ENSMUST00000104616 130 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm25224-201ENSMUST00000158195 68 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm21638-201ENSMUST00000179473 836 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm37104-201ENSMUST00000193278 196 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm37417-201ENSMUST00000195257 454 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm43992-201ENSMUST00000204358 197 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm6112-201ENSMUST00000208037 629 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC091783.4-201ENSMUST00000224940 611 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Hmgn3Q9DCB1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Mir147-201ENSMUST00000102354 79 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm15108-201ENSMUST00000116160 803 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm25539-201ENSMUST00000116886 122 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm15111-201ENSMUST00000122142 878 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm29452-201ENSMUST00000187996 313 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm28860-201ENSMUST00000188103 313 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm18327-201ENSMUST00000202426 830 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm45078-201ENSMUST00000205343 546 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm45879-201ENSMUST00000212521 392 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm5176-202ENSMUST00000220267 583 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Hmgn3Q9DCB1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm12757-201ENSMUST00000119465 800 ntBASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm22563-201ENSMUST00000157333 269 ntBASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.26□□□□□ -2.05
Hmgn3Q9DCB1 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms