Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm21539-201ENSMUST00000177925 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17522-201ENSMUST00000178144 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21599-201ENSMUST00000178249 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21914-201ENSMUST00000178452 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21723-201ENSMUST00000178692 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21916-201ENSMUST00000178771 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21801-201ENSMUST00000178865 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21633-201ENSMUST00000178941 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21821-201ENSMUST00000179646 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21588-201ENSMUST00000180074 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm25942-201ENSMUST00000180080 110 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21780-201ENSMUST00000180128 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21572-201ENSMUST00000180134 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21529-201ENSMUST00000180175 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm7909-201ENSMUST00000182688 614 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm29370-202ENSMUST00000187476 499 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm28358-202ENSMUST00000189292 223 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm42516-201ENSMUST00000198691 767 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Mir325-201ENSMUST00000083491 98 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Chmp2aQ9DB34 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm12090-201ENSMUST00000118692 758 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm15195-201ENSMUST00000118775 263 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm16458-201ENSMUST00000121428 502 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm24190-201ENSMUST00000157976 216 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm24520-201ENSMUST00000179510 110 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm26991-201ENSMUST00000180950 620 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm28196-201ENSMUST00000187719 640 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm37428-201ENSMUST00000193886 137 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm37288-201ENSMUST00000193963 334 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm45513-201ENSMUST00000210228 376 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 LOC667541-201ENSMUST00000223408 278 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Mir193a-201ENSMUST00000083461 66 ntBASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp2aQ9DB34 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm25308-201ENSMUST00000104171 158 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm24376-201ENSMUST00000104399 127 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm13504-201ENSMUST00000117490 316 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm11577-201ENSMUST00000118030 737 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm14607-201ENSMUST00000119119 491 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm12723-201ENSMUST00000120700 451 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm3835-201ENSMUST00000120752 403 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm22187-201ENSMUST00000157819 129 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm18415-201ENSMUST00000177464 647 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm29492-201ENSMUST00000187124 457 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm43239-201ENSMUST00000200131 201 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm44348-201ENSMUST00000200165 122 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Gm45247-201ENSMUST00000210757 309 ntBASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Chmp2aQ9DB34 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms