Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm25859-201ENSMUST00000083710 91 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm12156-201ENSMUST00000119188 554 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm7219-201ENSMUST00000119619 297 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm25264-201ENSMUST00000158519 117 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm24876-201ENSMUST00000158780 92 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Mir3062-201ENSMUST00000174986 105 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm24137-201ENSMUST00000180055 79 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm22391-201ENSMUST00000180356 79 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28339-201ENSMUST00000185845 696 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm29062-201ENSMUST00000186032 694 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28057-201ENSMUST00000186603 615 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm29634-201ENSMUST00000188467 696 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28896-201ENSMUST00000188609 696 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28699-201ENSMUST00000189193 696 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm20871-201ENSMUST00000191322 931 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm37433-201ENSMUST00000192695 678 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm37441-201ENSMUST00000194430 678 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm38107-201ENSMUST00000194873 696 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm17906-201ENSMUST00000202480 901 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm44513-201ENSMUST00000206811 439 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm9762-201ENSMUST00000036976 444 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gm26055-201ENSMUST00000083038 107 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Mir134-201ENSMUST00000083492 71 ntBASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ddx56Q9D0R4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm25537-201ENSMUST00000103851 109 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm11633-201ENSMUST00000118176 444 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm8217-201ENSMUST00000119136 465 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm11398-201ENSMUST00000120330 320 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm24784-201ENSMUST00000157640 62 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm20689-201ENSMUST00000176033 279 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm27805-201ENSMUST00000184513 79 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm28151-201ENSMUST00000189404 951 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm42164-201ENSMUST00000198881 379 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm43710-201ENSMUST00000199583 452 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm19726-201ENSMUST00000205008 240 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm44818-201ENSMUST00000206608 358 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm44609-201ENSMUST00000207157 460 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm45387-201ENSMUST00000209792 632 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Gm18113-201ENSMUST00000220630 303 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Mecom-201ENSMUST00000061088 348 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ddx56Q9D0R4 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm22597-201ENSMUST00000157602 80 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm26085-201ENSMUST00000157900 116 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm25603-201ENSMUST00000158361 105 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm25163-201ENSMUST00000158905 104 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms