Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm7870-201ENSMUST00000184467 616 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm29073-201ENSMUST00000185563 664 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm18505-201ENSMUST00000187360 790 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm29165-201ENSMUST00000190655 664 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm29211-201ENSMUST00000191470 664 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm7468-201ENSMUST00000203900 652 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm29754-201ENSMUST00000206269 358 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm24951-201ENSMUST00000102182 109 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm23133-201ENSMUST00000104255 135 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Mir883a-201ENSMUST00000104824 76 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm11913-201ENSMUST00000119094 336 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm13627-201ENSMUST00000119700 706 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm11931-201ENSMUST00000121630 447 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm24503-201ENSMUST00000158454 135 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm20415-201ENSMUST00000172877 423 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm28847-201ENSMUST00000186778 700 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm29365-201ENSMUST00000189461 699 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm22304-201ENSMUST00000082688 129 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 AF357341-201ENSMUST00000083088 75 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ddx28Q9CWT6 Gm336-201ENSMUST00000186376 1480 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm12102-201ENSMUST00000118251 604 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm13228-201ENSMUST00000118937 634 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm12515-201ENSMUST00000120116 361 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm22204-201ENSMUST00000122654 327 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm24850-201ENSMUST00000158029 119 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm23059-201ENSMUST00000158978 107 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm25873-201ENSMUST00000180317 107 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm8600-201ENSMUST00000186320 905 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm29263-201ENSMUST00000188718 463 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm37817-201ENSMUST00000195276 434 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm8820-201ENSMUST00000204077 571 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm18597-201ENSMUST00000209519 694 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm2059-201ENSMUST00000212025 287 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm8249-201ENSMUST00000219225 465 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm8274-201ENSMUST00000219820 463 ntBASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Ddx28Q9CWT6 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms