Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm10212-201ENSMUST00000087884 324 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm15125-201ENSMUST00000116185 800 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm11577-201ENSMUST00000118030 737 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm13228-201ENSMUST00000118937 634 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm14517-201ENSMUST00000119040 337 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm28438-201ENSMUST00000188299 345 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm8242-202ENSMUST00000193056 475 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm43115-201ENSMUST00000196244 160 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 LOC667541-201ENSMUST00000223408 278 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Gm22864-201ENSMUST00000083950 130 ntBASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Smc1aQ9CU62 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm14677-201ENSMUST00000117866 486 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm14599-201ENSMUST00000120469 474 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm22776-201ENSMUST00000178634 94 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm23767-201ENSMUST00000179278 94 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Mir6993-201ENSMUST00000184912 65 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Mir7062-201ENSMUST00000185038 66 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm28148-201ENSMUST00000186924 697 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm43217-201ENSMUST00000199513 367 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm18598-201ENSMUST00000207724 597 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm9712-201ENSMUST00000210842 311 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm45778-201ENSMUST00000211959 153 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm9765-201ENSMUST00000043170 321 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Smc1aQ9CU62 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm14518-201ENSMUST00000117351 542 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm14537-201ENSMUST00000117464 599 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm12902-201ENSMUST00000118389 322 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm12803-201ENSMUST00000118907 821 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm15733-201ENSMUST00000132957 242 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm25967-201ENSMUST00000157168 147 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm25438-201ENSMUST00000158281 110 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm7346-201ENSMUST00000169661 476 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm38268-201ENSMUST00000195813 193 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm44016-201ENSMUST00000203463 164 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm44927-201ENSMUST00000207573 716 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm35262-201ENSMUST00000215133 267 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm26203-201ENSMUST00000082911 114 ntBASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smc1aQ9CU62 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms