Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm25534-201ENSMUST00000175365 125 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm24365-201ENSMUST00000175384 125 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm44310-201ENSMUST00000175424 126 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm22639-201ENSMUST00000175591 125 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm24979-201ENSMUST00000178626 126 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm27611-201ENSMUST00000184690 108 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm27743-201ENSMUST00000185136 126 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm28069-201ENSMUST00000189926 214 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm18100-201ENSMUST00000200897 452 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm43899-201ENSMUST00000203675 246 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm43967-201ENSMUST00000203787 301 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm45588-201ENSMUST00000211213 630 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm7853-201ENSMUST00000100708 478 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Snord14c-201ENSMUST00000101927 86 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm22072-201ENSMUST00000116850 121 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm12492-201ENSMUST00000117665 564 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm11367-201ENSMUST00000117802 120 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm14677-201ENSMUST00000117866 486 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm16171-201ENSMUST00000118004 324 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm15231-201ENSMUST00000119174 447 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm11456-201ENSMUST00000121070 256 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm23470-201ENSMUST00000157129 120 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm23773-201ENSMUST00000158985 296 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm23053-201ENSMUST00000175136 96 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm22910-201ENSMUST00000178568 132 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm27392-201ENSMUST00000185041 101 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm18727-201ENSMUST00000185981 553 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm43521-201ENSMUST00000197838 255 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm18429-201ENSMUST00000198707 421 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm43107-201ENSMUST00000198729 255 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm42818-201ENSMUST00000198869 987 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm43478-201ENSMUST00000200381 292 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm44355-201ENSMUST00000200417 104 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm43954-201ENSMUST00000204634 544 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm44223-201ENSMUST00000204854 114 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm18598-201ENSMUST00000207724 597 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm45409-201ENSMUST00000211486 252 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm46194-201ENSMUST00000218136 320 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm12582-201ENSMUST00000030555 697 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Snord35b-201ENSMUST00000082833 87 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm23102-201ENSMUST00000083724 116 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm26165-201ENSMUST00000083791 138 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.48□□□□□ -2.01
RTRAFQ9CQE8 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm15268-201ENSMUST00000118845 352 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm22478-201ENSMUST00000122570 154 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm26477-201ENSMUST00000122617 323 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm13901-201ENSMUST00000137252 468 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm9785-202ENSMUST00000144563 593 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm5958-201ENSMUST00000147698 297 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm24289-201ENSMUST00000157629 135 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm22776-201ENSMUST00000178634 94 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm23767-201ENSMUST00000179278 94 ntBASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RTRAFQ9CQE8 Gm27698-201ENSMUST00000184060 249 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms