Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cstf1Q99LC2 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.4□□□□□ -1.87
Cstf1Q99LC2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cstf1Q99LC2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cstf1Q99LC2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.4□□□□□ -1.87
Cstf1Q99LC2 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cstf1Q99LC2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cstf1Q99LC2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm13650-201ENSMUST00000117729 433 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm13273-201ENSMUST00000119737 159 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm12118-201ENSMUST00000119766 532 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm14599-201ENSMUST00000120469 474 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm12998-201ENSMUST00000122445 789 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm22339-201ENSMUST00000157718 62 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm28113-201ENSMUST00000188280 229 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm18327-201ENSMUST00000202426 830 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm7624-201ENSMUST00000209702 435 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm18921-201ENSMUST00000221798 366 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm25699-201ENSMUST00000082896 167 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm8074-201ENSMUST00000095071 252 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm336-201ENSMUST00000186376 1480 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.39□□□□□ -1.87
Cstf1Q99LC2 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm24096-201ENSMUST00000103905 110 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm14607-201ENSMUST00000119119 491 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm15193-201ENSMUST00000120224 865 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm16053-201ENSMUST00000120511 188 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm22478-201ENSMUST00000122570 154 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm14389-201ENSMUST00000140453 241 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm26215-201ENSMUST00000158584 139 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm27308-201ENSMUST00000184807 233 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm44320-201ENSMUST00000199276 86 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm31520-201ENSMUST00000203048 733 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Snord35b-201ENSMUST00000082833 87 ntBASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Cstf1Q99LC2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm12788-201ENSMUST00000119090 308 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm24289-201ENSMUST00000157629 135 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm23123-201ENSMUST00000157648 144 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm27445-201ENSMUST00000184484 72 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm7837-201ENSMUST00000190873 412 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm37708-201ENSMUST00000192337 895 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm37288-201ENSMUST00000193963 334 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm37290-201ENSMUST00000195775 339 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms