Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm26145-201ENSMUST00000104476 127 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm13731-201ENSMUST00000117332 196 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm15026-201ENSMUST00000119219 458 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm13717-201ENSMUST00000119868 365 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm14656-201ENSMUST00000120342 502 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm12858-201ENSMUST00000121913 208 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm21816-201ENSMUST00000179255 360 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm28148-201ENSMUST00000186924 697 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm29389-201ENSMUST00000191562 352 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm29704-201ENSMUST00000196011 253 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm43659-201ENSMUST00000200894 628 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc40Q8BI79 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm23532-201ENSMUST00000104569 112 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm15783-201ENSMUST00000117521 633 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm9157-201ENSMUST00000117673 225 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm37495-201ENSMUST00000194590 264 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm44030-201ENSMUST00000204865 432 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm45146-201ENSMUST00000207108 221 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm45778-201ENSMUST00000211959 153 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm7119-201ENSMUST00000221345 695 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.56□□□□□ -1.84
Ccdc40Q8BI79 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm15018-201ENSMUST00000117090 633 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm14981-201ENSMUST00000117325 943 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm11913-201ENSMUST00000119094 336 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm15014-201ENSMUST00000120742 258 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm9001-201ENSMUST00000121642 399 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm25967-201ENSMUST00000157168 147 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm23602-201ENSMUST00000157258 132 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm22034-201ENSMUST00000157283 134 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm23415-201ENSMUST00000175519 83 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm27921-201ENSMUST00000183968 108 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm6680-201ENSMUST00000192789 950 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm37417-201ENSMUST00000195257 454 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm43043-201ENSMUST00000196579 412 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm42465-201ENSMUST00000197036 492 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm35876-201ENSMUST00000205044 459 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm19126-201ENSMUST00000207896 509 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm9712-201ENSMUST00000210842 311 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Ccdc40Q8BI79 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms