Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.18□□□□□ -1.58
Ubp1Q811S7 Gm10343-201ENSMUST00000096279 348 ntBASIC5.18□□□□□ -1.58
Ubp1Q811S7 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.18□□□□□ -1.58
Ubp1Q811S7 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.18□□□□□ -1.58
Ubp1Q811S7 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.18□□□□□ -1.58
Ubp1Q811S7 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ubp1Q811S7 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm25758-201ENSMUST00000103987 129 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm23593-201ENSMUST00000104309 120 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm15994-201ENSMUST00000118029 402 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm13550-201ENSMUST00000118185 525 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm11718-201ENSMUST00000119942 537 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm14831-201ENSMUST00000120253 409 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm14841-201ENSMUST00000121067 758 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm6969-201ENSMUST00000140065 342 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm25606-201ENSMUST00000158363 95 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm20534-201ENSMUST00000172957 172 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm22420-201ENSMUST00000178795 126 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm28017-201ENSMUST00000183434 126 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Mir6412-201ENSMUST00000184477 97 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm37882-201ENSMUST00000195254 196 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm33952-201ENSMUST00000197795 408 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm42453-201ENSMUST00000200477 409 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm44648-201ENSMUST00000208267 329 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm4987-201ENSMUST00000078326 408 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.17□□□□□ -1.58
Ubp1Q811S7 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubp1Q811S7 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm23120-201ENSMUST00000157654 287 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm4761-201ENSMUST00000178086 582 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm22621-201ENSMUST00000179678 74 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm29192-201ENSMUST00000190942 377 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.16□□□□□ -1.58
Ubp1Q811S7 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubp1Q811S7 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.15□□□□□ -1.58
Ubp1Q811S7 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.15□□□□□ -1.58
Ubp1Q811S7 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubp1Q811S7 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms