Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm9314-201ENSMUST00000199881 1528 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm14971-201ENSMUST00000117980 663 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm24840-201ENSMUST00000122603 147 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Mir3968-201ENSMUST00000175355 100 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm18448-201ENSMUST00000186286 599 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm43901-201ENSMUST00000203247 453 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm7117-201ENSMUST00000071515 387 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm14159-201ENSMUST00000119832 451 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Mir5128-201ENSMUST00000175217 84 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm45778-201ENSMUST00000211959 153 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.16□□□□□ -2.06
Ttc28Q80XJ3 Gm37911-201ENSMUST00000193099 1545 ntBASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 Gm24096-201ENSMUST00000103905 110 ntBASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Ttc28Q80XJ3 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm15421-202ENSMUST00000118224 399 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm6374-201ENSMUST00000159051 788 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm27786-201ENSMUST00000184337 70 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Ttc28Q80XJ3 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm15714-201ENSMUST00000117168 250 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm14977-201ENSMUST00000121626 812 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm24664-201ENSMUST00000158939 100 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm17091-201ENSMUST00000163248 357 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm24317-201ENSMUST00000178536 107 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 n-R5s205-201ENSMUST00000083149 125 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm4528-201ENSMUST00000207905 551 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.14□□□□□ -2.07
Ttc28Q80XJ3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm13756-201ENSMUST00000117618 222 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm23347-201ENSMUST00000083823 82 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm14768-201ENSMUST00000122126 678 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm25902-201ENSMUST00000158493 318 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Gm44376-201ENSMUST00000197570 128 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 AC118230.1-201ENSMUST00000220196 656 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ttc28Q80XJ3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Ttc28Q80XJ3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ttc28Q80XJ3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms