Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm25135-201ENSMUST00000082648 143 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Mir34b-201ENSMUST00000083558 84 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm26165-201ENSMUST00000083791 138 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Svet1-201ENSMUST00000209370 3940 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm12252-201ENSMUST00000119517 219 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm12825-201ENSMUST00000120249 563 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm11522-201ENSMUST00000120533 176 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm23228-201ENSMUST00000157296 270 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm24503-201ENSMUST00000158454 135 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm8224-201ENSMUST00000166178 497 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm26219-201ENSMUST00000175216 71 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Mir3066-201ENSMUST00000175296 83 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm4854-201ENSMUST00000185902 574 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm29097-201ENSMUST00000190273 422 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm43541-201ENSMUST00000197208 581 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm43441-201ENSMUST00000201458 205 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 AC147101.1-201ENSMUST00000217964 312 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm46998-201ENSMUST00000221444 330 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm5955-201ENSMUST00000222712 219 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 AC147628.1-201ENSMUST00000228193 688 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm5548-201ENSMUST00000055878 397 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm7381-201ENSMUST00000098958 300 ntBASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ubfd1Q78JW9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ubfd1Q78JW9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Ubfd1Q78JW9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Ubfd1Q78JW9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm9078-201ENSMUST00000119126 617 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm25104-201ENSMUST00000122476 163 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm25163-201ENSMUST00000158905 104 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Mir6341-201ENSMUST00000183490 121 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm27313-201ENSMUST00000183500 142 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm17946-201ENSMUST00000186856 538 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm37433-201ENSMUST00000192695 678 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm37441-201ENSMUST00000194430 678 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm43853-201ENSMUST00000197162 301 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm43559-201ENSMUST00000198755 466 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 BC051076-202ENSMUST00000199477 2868 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm18672-201ENSMUST00000208035 270 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm45614-201ENSMUST00000209994 721 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm19441-201ENSMUST00000221545 330 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm24611-201ENSMUST00000083272 107 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm25792-201ENSMUST00000083289 100 ntBASIC4.08□□□□□ -1.76
Ubfd1Q78JW9 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms