Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx55Q6ZPL9 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm25088-201ENSMUST00000101803 79 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm24987-201ENSMUST00000104453 134 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm12878-201ENSMUST00000118744 332 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm12897-201ENSMUST00000120341 250 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm13852-201ENSMUST00000122350 242 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm24314-201ENSMUST00000158274 123 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm22889-201ENSMUST00000158639 58 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm24636-201ENSMUST00000158673 288 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm37300-201ENSMUST00000193327 280 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm43026-201ENSMUST00000202972 325 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm44523-201ENSMUST00000205616 417 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Mir370-201ENSMUST00000083499 79 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm7381-201ENSMUST00000098958 300 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.7□□□□□ -1.66
Ddx55Q6ZPL9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm15268-201ENSMUST00000118845 352 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm12495-201ENSMUST00000119750 447 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm11403-201ENSMUST00000122195 369 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm24664-201ENSMUST00000158939 100 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm16490-201ENSMUST00000165299 351 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm28661-201ENSMUST00000188231 681 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm43652-201ENSMUST00000196219 675 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm43541-201ENSMUST00000197208 581 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm44465-201ENSMUST00000199536 114 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm17906-201ENSMUST00000202480 901 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm2446-201ENSMUST00000220144 772 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Mir504-201ENSMUST00000093602 79 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx55Q6ZPL9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm13386-201ENSMUST00000117677 124 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm15988-201ENSMUST00000118677 367 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm11645-201ENSMUST00000121589 649 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm23084-201ENSMUST00000157850 114 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm25194-201ENSMUST00000177987 79 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm37239-201ENSMUST00000193510 141 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm19418-201ENSMUST00000197436 580 ntBASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.68□□□□□ -1.66
Ddx55Q6ZPL9 Gm43039-201ENSMUST00000202883 963 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms