Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm13273-201ENSMUST00000119737 159 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Mir6907-201ENSMUST00000183764 71 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm29597-201ENSMUST00000188035 308 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm43405-201ENSMUST00000198642 337 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm44903-201ENSMUST00000206840 130 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Tpm4Q6IRU2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm14786-201ENSMUST00000117127 944 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm13504-201ENSMUST00000117490 316 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm12803-201ENSMUST00000118907 821 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm12213-201ENSMUST00000119924 353 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm11414-201ENSMUST00000121795 263 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm22277-201ENSMUST00000157204 277 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm22766-201ENSMUST00000158372 99 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm24876-201ENSMUST00000158780 92 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm25971-201ENSMUST00000158953 286 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm17711-201ENSMUST00000172028 237 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm37288-201ENSMUST00000193963 334 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm19039-201ENSMUST00000204363 575 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm43954-201ENSMUST00000204634 544 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm8942-201ENSMUST00000217892 400 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm5176-202ENSMUST00000220267 583 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Tpm4Q6IRU2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm12492-201ENSMUST00000117665 564 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm15147-201ENSMUST00000122263 483 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm23599-201ENSMUST00000157261 251 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm29105-201ENSMUST00000187256 450 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Tpm4Q6IRU2 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Gm7123-201ENSMUST00000117647 213 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Gm24443-201ENSMUST00000157242 132 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Snord93-201ENSMUST00000175580 71 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Mir6408-201ENSMUST00000183643 91 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Gm27786-201ENSMUST00000184337 70 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Gm28975-201ENSMUST00000186412 686 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.05□□□□□ -1.92
Tpm4Q6IRU2 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms