Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.58□□□□□ -2
Cep290Q6A078 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cep290Q6A078 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Cep290Q6A078 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.58□□□□□ -2
Cep290Q6A078 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cep290Q6A078 Gm27315-201ENSMUST00000183977 154 ntBASIC2.58□□□□□ -2
Cep290Q6A078 Gm43929-201ENSMUST00000203025 409 ntBASIC2.58□□□□□ -2
Cep290Q6A078 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.58□□□□□ -2
Cep290Q6A078 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Cep290Q6A078 Gm13788-201ENSMUST00000120767 601 ntBASIC2.57□□□□□ -2
Cep290Q6A078 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 Gm43901-201ENSMUST00000203247 453 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Gm18704-201ENSMUST00000219736 446 ntBASIC2.57□□□□□ -2
Cep290Q6A078 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cep290Q6A078 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cep290Q6A078 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.57□□□□□ -2
Cep290Q6A078 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cep290Q6A078 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cep290Q6A078 Gm15025-201ENSMUST00000118434 418 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Gm18871-201ENSMUST00000218655 745 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Gm4057-201ENSMUST00000221407 368 ntBASIC2.57□□□□□ -2
Cep290Q6A078 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.57□□□□□ -2
Cep290Q6A078 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.57□□□□□ -2
Cep290Q6A078 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.57□□□□□ -2
Cep290Q6A078 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Cep290Q6A078 Gm23942-201ENSMUST00000101956 107 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm24048-201ENSMUST00000102411 106 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm24858-201ENSMUST00000158058 323 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm27786-201ENSMUST00000184337 70 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm9818-201ENSMUST00000050900 255 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cep290Q6A078 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm22793-201ENSMUST00000157227 330 ntBASIC2.56□□□□□ -2
Cep290Q6A078 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cep290Q6A078 Mir6715-201ENSMUST00000184990 57 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cep290Q6A078 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.56□□□□□ -2
Cep290Q6A078 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cep290Q6A078 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.55□□□□□ -2
Cep290Q6A078 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Cep290Q6A078 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cep290Q6A078 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
Cep290Q6A078 Mir542-201ENSMUST00000102186 85 ntBASIC2.55□□□□□ -2
Cep290Q6A078 Gm37732-201ENSMUST00000194377 316 ntBASIC2.55□□□□□ -2
Cep290Q6A078 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.55□□□□□ -2
Cep290Q6A078 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cep290Q6A078 Gm26922-201ENSMUST00000082687 72 ntBASIC2.55□□□□□ -2
Cep290Q6A078 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.55□□□□□ -2
Cep290Q6A078 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cep290Q6A078 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Gm44431-201ENSMUST00000203500 413 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
Cep290Q6A078 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.54□□□□□ -2
Cep290Q6A078 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cep290Q6A078 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cep290Q6A078 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.54□□□□□ -2
Cep290Q6A078 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC2.54□□□□□ -2
Cep290Q6A078 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.54□□□□□ -2
Cep290Q6A078 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cep290Q6A078 Gm23264-201ENSMUST00000083372 107 ntBASIC2.54□□□□□ -2
Cep290Q6A078 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cep290Q6A078 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cep290Q6A078 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cep290Q6A078 Gm23043-201ENSMUST00000157890 109 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm26024-201ENSMUST00000158657 322 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cep290Q6A078 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.53□□□□□ -2
Cep290Q6A078 Gm24638-201ENSMUST00000179807 132 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Mir497-201ENSMUST00000200557 84 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm44030-201ENSMUST00000204865 432 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cep290Q6A078 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm22155-201ENSMUST00000083836 162 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cep290Q6A078 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cep290Q6A078 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Cep290Q6A078 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cep290Q6A078 Gm23824-201ENSMUST00000158741 276 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm20612-201ENSMUST00000176318 236 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm24317-201ENSMUST00000178536 107 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm28623-201ENSMUST00000187219 192 ntBASIC2.53□□□□□ -2
Cep290Q6A078 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.53□□□□□ -2
Cep290Q6A078 Gm18453-201ENSMUST00000208000 626 ntBASIC2.53□□□□□ -2
Cep290Q6A078 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms