Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm14939-201ENSMUST00000120347 680 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm14589-201ENSMUST00000121640 727 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm26993-201ENSMUST00000182766 789 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm28794-201ENSMUST00000185276 136 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.07□□□□□ -2.08
Col7a1Q63870 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm12513-201ENSMUST00000118617 352 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm16561-201ENSMUST00000163001 192 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Trbv22-201ENSMUST00000191697 291 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm43676-201ENSMUST00000197532 540 ntBASIC2.07□□□□□ -2.08
Col7a1Q63870 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col7a1Q63870 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col7a1Q63870 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm13432-201ENSMUST00000118861 241 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm12607-201ENSMUST00000120724 493 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm20612-201ENSMUST00000176318 236 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm44208-201ENSMUST00000205199 421 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col7a1Q63870 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm14897-201ENSMUST00000118213 207 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm14586-201ENSMUST00000119571 408 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm17091-201ENSMUST00000163248 357 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm27894-201ENSMUST00000184177 92 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Gm25402-201ENSMUST00000082966 131 ntBASIC2.06□□□□□ -2.08
Col7a1Q63870 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col7a1Q63870 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col7a1Q63870 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm14694-201ENSMUST00000121856 282 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm37455-201ENSMUST00000191993 529 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col7a1Q63870 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm16260-201ENSMUST00000155141 304 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm28628-201ENSMUST00000187006 264 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm28629-201ENSMUST00000187309 263 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.05□□□□□ -2.08
Col7a1Q63870 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm28002-201ENSMUST00000184832 100 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm18387-201ENSMUST00000220333 702 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col7a1Q63870 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm13788-201ENSMUST00000120767 601 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Mir6901-201ENSMUST00000185062 62 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.04□□□□□ -2.08
Col7a1Q63870 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.04□□□□□ -2.08
Col7a1Q63870 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col7a1Q63870 Gm44525-201ENSMUST00000183129 2634 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 AC155921.1-201ENSMUST00000216568 3841 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms