Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.2□□□□□ -1.74
CtcfQ61164 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcfQ61164 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcfQ61164 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcfQ61164 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CtcfQ61164 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CtcfQ61164 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CtcfQ61164 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.2□□□□□ -1.74
CtcfQ61164 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CtcfQ61164 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CtcfQ61164 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcfQ61164 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm23319-201ENSMUST00000104467 131 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm24403-201ENSMUST00000104616 130 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13273-201ENSMUST00000119737 159 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm11876-201ENSMUST00000120002 269 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm12045-201ENSMUST00000122122 573 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm12755-201ENSMUST00000122297 282 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm22107-201ENSMUST00000122548 100 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm25555-201ENSMUST00000158078 111 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm11392-201ENSMUST00000181419 710 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC4.19□□□□□ -1.74
CtcfQ61164 Gm27317-201ENSMUST00000183533 95 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm8790-201ENSMUST00000194108 322 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm5358-201ENSMUST00000212814 353 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm18557-201ENSMUST00000218710 433 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcfQ61164 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CtcfQ61164 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CtcfQ61164 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.19□□□□□ -1.74
CtcfQ61164 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CtcfQ61164 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Zfp640-202ENSMUST00000224116 1562 ntBASIC4.19□□□□□ -1.74
CtcfQ61164 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CtcfQ61164 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm15180-201ENSMUST00000117745 492 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm11566-201ENSMUST00000118550 203 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm3788-201ENSMUST00000119949 136 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm8244-201ENSMUST00000121254 264 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm25058-201ENSMUST00000157365 128 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm23754-201ENSMUST00000157576 63 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm24537-201ENSMUST00000157950 102 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm2862-201ENSMUST00000161524 328 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CtcfQ61164 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Mir5134-201ENSMUST00000175529 78 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm27477-201ENSMUST00000184649 143 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm42958-201ENSMUST00000197595 318 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm44754-201ENSMUST00000208155 400 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.18□□□□□ -1.74
CtcfQ61164 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 AC122393.1-201ENSMUST00000226570 319 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CtcfQ61164 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CtcfQ61164 Mir30e-201ENSMUST00000083475 92 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CtcfQ61164 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.18□□□□□ -1.74
CtcfQ61164 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CtcfQ61164 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CtcfQ61164 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CtcfQ61164 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.17□□□□□ -1.74
CtcfQ61164 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm25726-201ENSMUST00000104529 129 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Mir466n-201ENSMUST00000104798 94 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm14624-201ENSMUST00000117746 192 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm11923-201ENSMUST00000118135 508 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm13314-201ENSMUST00000118742 335 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms