Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25203-201ENSMUST00000082842 215 ntBASIC3.11□□□□□ -1.91
Usf1Q61069 Gm26203-201ENSMUST00000082911 114 ntBASIC3.11□□□□□ -1.91
Usf1Q61069 Gm24817-201ENSMUST00000093672 105 ntBASIC3.11□□□□□ -1.91
Usf1Q61069 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usf1Q61069 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Usf1Q61069 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usf1Q61069 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usf1Q61069 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Usf1Q61069 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.11□□□□□ -1.91
Usf1Q61069 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.11□□□□□ -1.91
Usf1Q61069 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.11□□□□□ -1.91
Usf1Q61069 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Usf1Q61069 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm23697-201ENSMUST00000103897 110 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm14677-201ENSMUST00000117866 486 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm12793-201ENSMUST00000119268 292 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm14939-201ENSMUST00000120347 680 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm16053-201ENSMUST00000120511 188 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm12578-201ENSMUST00000121244 417 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm14581-201ENSMUST00000121726 198 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm11471-201ENSMUST00000121824 198 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm17655-201ENSMUST00000167969 255 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Mir3092-201ENSMUST00000174954 96 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm29365-201ENSMUST00000189461 699 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm43651-201ENSMUST00000199796 439 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm43227-201ENSMUST00000202239 677 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm6064-201ENSMUST00000203999 454 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm18672-201ENSMUST00000208035 270 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usf1Q61069 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm24611-201ENSMUST00000083272 107 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.1□□□□□ -1.91
Usf1Q61069 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Usf1Q61069 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usf1Q61069 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usf1Q61069 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.09□□□□□ -1.91
Usf1Q61069 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm15466-201ENSMUST00000122299 333 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm12998-201ENSMUST00000122445 789 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.09□□□□□ -1.91
Usf1Q61069 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm23167-201ENSMUST00000157155 103 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm23592-201ENSMUST00000157859 117 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm23312-201ENSMUST00000158774 102 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm19203-201ENSMUST00000174049 939 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm23402-201ENSMUST00000178130 107 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm28113-201ENSMUST00000188280 229 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm37288-201ENSMUST00000193963 334 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm38356-201ENSMUST00000194313 408 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.09□□□□□ -1.91
Usf1Q61069 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm17989-201ENSMUST00000211543 412 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.09□□□□□ -1.91
Usf1Q61069 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Snora31-201ENSMUST00000083213 130 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Usf1Q61069 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.09□□□□□ -1.91
Usf1Q61069 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usf1Q61069 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms