Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm14897-201ENSMUST00000118213 207 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm14577-201ENSMUST00000121134 256 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm22083-201ENSMUST00000157586 102 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm23588-201ENSMUST00000157659 99 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm24503-201ENSMUST00000158454 135 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Mir6345-201ENSMUST00000184286 128 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm37119-201ENSMUST00000195691 389 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm25480-201ENSMUST00000083217 133 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Mir188-201ENSMUST00000083464 68 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Mir27a-201ENSMUST00000083510 87 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Gm24917-201ENSMUST00000083935 104 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Trav3-1Q5R1I8 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Trav3-1Q5R1I8 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.78□□□□□ -2.13
Trav3-1Q5R1I8 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
Trav3-1Q5R1I8 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm28322-201ENSMUST00000185627 1475 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm15988-201ENSMUST00000118677 367 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm7219-201ENSMUST00000119619 297 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm14591-201ENSMUST00000120407 518 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm22480-201ENSMUST00000122568 128 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm22310-201ENSMUST00000157509 116 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm26310-201ENSMUST00000157766 117 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm26355-201ENSMUST00000158220 105 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm24082-201ENSMUST00000175175 83 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Mir1251-201ENSMUST00000175486 84 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm8532-201ENSMUST00000179174 461 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm19200-201ENSMUST00000182579 1001 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm27470-201ENSMUST00000184070 210 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm6615-201ENSMUST00000199426 631 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Supt4b-201ENSMUST00000214434 351 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 AC069074.2-201ENSMUST00000217819 428 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm24147-201ENSMUST00000082763 144 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm26494-201ENSMUST00000083154 143 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm23456-201ENSMUST00000083335 137 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm24493-201ENSMUST00000083805 143 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.77□□□□□ -2.13
Trav3-1Q5R1I8 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm24117-201ENSMUST00000103973 133 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm15159-201ENSMUST00000117062 764 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm11393-201ENSMUST00000118019 288 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm13082-201ENSMUST00000118877 561 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm22204-201ENSMUST00000122654 327 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm1989-201ENSMUST00000126244 636 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm23773-201ENSMUST00000158985 296 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm8902-201ENSMUST00000174341 1096 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm23813-201ENSMUST00000175153 77 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Mir5134-201ENSMUST00000175529 78 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm26061-201ENSMUST00000175584 108 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm10292-201ENSMUST00000183142 581 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Mir7072-201ENSMUST00000184542 60 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm27564-201ENSMUST00000185196 96 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm2950-201ENSMUST00000185530 520 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm37708-201ENSMUST00000192337 895 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Trbv28-201ENSMUST00000192804 264 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm38018-201ENSMUST00000195651 540 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC142499.1-201ENSMUST00000220036 374 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC140930.4-201ENSMUST00000220750 150 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms