Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm23716-201ENSMUST00000157348 144 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm24553-201ENSMUST00000158653 131 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm20651-201ENSMUST00000177219 329 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm27733-201ENSMUST00000184803 68 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm32340-201ENSMUST00000192883 259 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm5309-201ENSMUST00000197416 677 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm43405-201ENSMUST00000198642 337 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm43493-201ENSMUST00000199837 202 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm7530-201ENSMUST00000218466 605 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim58Q5NCC9 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Mir673-201ENSMUST00000102361 91 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm24671-201ENSMUST00000104159 158 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm15195-201ENSMUST00000118775 263 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm14905-201ENSMUST00000122351 639 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm22186-201ENSMUST00000157822 122 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm9587-201ENSMUST00000172449 454 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm24080-201ENSMUST00000175178 232 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Mir3106-201ENSMUST00000175401 82 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm28688-201ENSMUST00000187301 268 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm1833-201ENSMUST00000191608 682 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm43393-201ENSMUST00000200147 194 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm45071-201ENSMUST00000205353 571 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Gm45696-201ENSMUST00000212088 985 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim58Q5NCC9 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm24314-201ENSMUST00000158274 123 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm23583-201ENSMUST00000158533 289 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm22252-201ENSMUST00000179316 79 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm43494-201ENSMUST00000197672 388 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm22897-201ENSMUST00000197860 128 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim58Q5NCC9 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm14162-201ENSMUST00000121985 601 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm8840-201ENSMUST00000122454 386 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm23792-201ENSMUST00000122557 93 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm14389-201ENSMUST00000140453 241 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm25185-201ENSMUST00000157754 96 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm26585-201ENSMUST00000180890 630 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm26915-201ENSMUST00000183080 748 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms