Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir27a-201ENSMUST00000083510 87 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm22676-201ENSMUST00000116972 129 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm14981-201ENSMUST00000117325 943 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm15382-201ENSMUST00000118011 537 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm16053-201ENSMUST00000120511 188 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm8840-201ENSMUST00000122454 386 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm22956-201ENSMUST00000122520 80 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm23791-201ENSMUST00000122553 293 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm22322-201ENSMUST00000157151 111 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm17038-201ENSMUST00000166586 494 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm5929-201ENSMUST00000166883 487 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm18520-201ENSMUST00000174783 658 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm37418-201ENSMUST00000195031 274 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm43368-201ENSMUST00000200638 409 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm18338-201ENSMUST00000222381 560 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.29□□□□□ -1.88
Usp28Q5I043 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usp28Q5I043 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp28Q5I043 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Mir706-201ENSMUST00000102262 84 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm25466-201ENSMUST00000103995 132 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm25317-201ENSMUST00000116824 129 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm15951-201ENSMUST00000118377 400 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm14901-201ENSMUST00000119001 283 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm11876-201ENSMUST00000120002 269 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm14907-201ENSMUST00000121948 854 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usp28Q5I043 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usp28Q5I043 Snord93-201ENSMUST00000175580 71 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm28146-201ENSMUST00000185517 701 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm6064-201ENSMUST00000203999 454 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm10297-201ENSMUST00000207136 651 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm29884-201ENSMUST00000218403 453 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm23460-201ENSMUST00000083258 109 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.28□□□□□ -1.88
Usp28Q5I043 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Usp28Q5I043 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm4732-201ENSMUST00000118778 473 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm23819-201ENSMUST00000158744 109 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm24736-201ENSMUST00000158862 130 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm25120-201ENSMUST00000180148 79 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm37290-201ENSMUST00000195775 339 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm43494-201ENSMUST00000197672 388 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm44964-201ENSMUST00000207011 273 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm20948-201ENSMUST00000211091 449 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm45588-201ENSMUST00000211213 630 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm7948-201ENSMUST00000212607 844 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms