Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm23960-201ENSMUST00000157206 131 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm28466-201ENSMUST00000190678 659 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm9472-201ENSMUST00000221625 526 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm22622-201ENSMUST00000082870 129 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm28724-202ENSMUST00000194218 295 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Shank3Q4ACU6 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm24177-201ENSMUST00000158927 131 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm28625-201ENSMUST00000188309 205 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm1833-201ENSMUST00000191608 682 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Mir6925-201ENSMUST00000197857 70 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm46996-201ENSMUST00000220924 408 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm23289-201ENSMUST00000175615 108 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm27399-201ENSMUST00000184250 78 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.36□□□□□ -1.87
Shank3Q4ACU6 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shank3Q4ACU6 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm16383-201ENSMUST00000118122 232 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm25048-201ENSMUST00000158598 91 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm15974-201ENSMUST00000159103 531 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm17030-201ENSMUST00000167016 393 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm19791-201ENSMUST00000180398 859 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm26585-201ENSMUST00000180890 630 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Mir3087-201ENSMUST00000199405 56 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm45382-201ENSMUST00000210607 151 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.35□□□□□ -1.87
Shank3Q4ACU6 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Shank3Q4ACU6 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Snord65-201ENSMUST00000104269 72 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm26355-201ENSMUST00000158220 105 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm8338-201ENSMUST00000163928 363 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm37676-201ENSMUST00000195496 507 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm44431-201ENSMUST00000203500 413 ntBASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Shank3Q4ACU6 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Shank3Q4ACU6 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.33□□□□□ -1.88
Shank3Q4ACU6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms