Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14577-201ENSMUST00000121134 256 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm26933-201ENSMUST00000182320 827 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm6590-201ENSMUST00000203343 687 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm45344-201ENSMUST00000211610 341 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm7540-201ENSMUST00000219764 926 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Gm25799-201ENSMUST00000082643 107 ntBASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm15382-201ENSMUST00000118011 537 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm24592-201ENSMUST00000122505 106 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm23234-201ENSMUST00000157304 134 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm37290-201ENSMUST00000195775 339 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Upf3aQ3ULJ3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm24068-201ENSMUST00000104513 132 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm13080-201ENSMUST00000120556 420 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm12858-201ENSMUST00000121913 208 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm11229-201ENSMUST00000121993 437 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm15274-201ENSMUST00000131442 291 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm21979-201ENSMUST00000139887 291 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm15259-201ENSMUST00000151262 291 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm15279-201ENSMUST00000155593 288 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm26214-201ENSMUST00000158581 107 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm17187-201ENSMUST00000164622 410 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Mir3965-201ENSMUST00000175570 69 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm18433-202ENSMUST00000195682 196 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm43746-201ENSMUST00000200028 317 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm22829-201ENSMUST00000083771 106 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.31□□□□□ -1.88
Upf3aQ3ULJ3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm15108-201ENSMUST00000116160 803 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm14142-201ENSMUST00000117833 296 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm15111-201ENSMUST00000122142 878 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm26477-201ENSMUST00000122617 323 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms