Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm28785-201ENSMUST00000187478 379 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm38061-201ENSMUST00000192490 365 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm42509-201ENSMUST00000197390 781 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm19457-201ENSMUST00000200995 448 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm44703-201ENSMUST00000205724 248 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm45209-201ENSMUST00000207122 353 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm45380-201ENSMUST00000210465 315 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm336-201ENSMUST00000186376 1480 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Brf2Q3UAW9 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Brf2Q3UAW9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Brf2Q3UAW9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm22591-201ENSMUST00000104243 106 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm14360-201ENSMUST00000120670 393 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm11260-201ENSMUST00000121163 942 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm11438-201ENSMUST00000121582 189 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm11645-201ENSMUST00000121589 649 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm23885-201ENSMUST00000122682 294 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm23231-201ENSMUST00000157299 104 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm22211-201ENSMUST00000158097 156 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm23799-201ENSMUST00000175559 120 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm18396-201ENSMUST00000177095 361 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm23568-201ENSMUST00000177960 92 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm24829-201ENSMUST00000179245 92 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm11394-201ENSMUST00000181421 517 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm30280-201ENSMUST00000192214 262 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm4248-201ENSMUST00000196905 316 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm43026-201ENSMUST00000202972 325 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm22740-201ENSMUST00000083439 109 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Brf2Q3UAW9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.65□□□□□ -1.83
Brf2Q3UAW9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm11913-201ENSMUST00000119094 336 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm15364-201ENSMUST00000119618 585 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm11835-201ENSMUST00000120635 663 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm11430-201ENSMUST00000121317 217 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm22219-201ENSMUST00000157562 319 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm16303-201ENSMUST00000161498 390 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm24897-201ENSMUST00000179033 107 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm19498-201ENSMUST00000191128 331 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm17781-201ENSMUST00000195232 649 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm19649-201ENSMUST00000201126 822 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms