Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm26027-201ENSMUST00000122725 268 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm24787-201ENSMUST00000157380 123 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Mir3106-201ENSMUST00000175401 82 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm29747-201ENSMUST00000194764 585 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm18602-201ENSMUST00000209794 851 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm8249-201ENSMUST00000219225 465 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.02□□□□□ -1.93
Hoxc4Q08624 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Hoxc4Q08624 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm14840-201ENSMUST00000122135 594 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm14903-201ENSMUST00000122435 537 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm23391-201ENSMUST00000157579 104 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Mir6993-201ENSMUST00000184912 65 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Trdv3-201ENSMUST00000198551 309 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm43368-201ENSMUST00000200638 409 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm19126-201ENSMUST00000207896 509 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm45409-201ENSMUST00000211486 252 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Hoxc4Q08624 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.01□□□□□ -1.93
Hoxc4Q08624 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hoxc4Q08624 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm42448-201ENSMUST00000197122 2644 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hoxc4Q08624 Mir693-201ENSMUST00000102187 89 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm6429-201ENSMUST00000117144 475 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm13504-201ENSMUST00000117490 316 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm14795-201ENSMUST00000118461 471 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm14901-201ENSMUST00000119001 283 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm15488-201ENSMUST00000121682 670 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm22322-201ENSMUST00000157151 111 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm5929-201ENSMUST00000166883 487 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm27163-201ENSMUST00000184767 409 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm28113-201ENSMUST00000188280 229 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm42516-201ENSMUST00000198691 767 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm6064-201ENSMUST00000203999 454 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3□□□□□ -1.93
Hoxc4Q08624 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hoxc4Q08624 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Hoxc4Q08624 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hoxc4Q08624 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm43665-201ENSMUST00000198672 1659 ntBASIC3□□□□□ -1.93
Hoxc4Q08624 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Hoxc4Q08624 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Hoxc4Q08624 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm15108-201ENSMUST00000116160 803 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm7071-201ENSMUST00000120458 462 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm12723-201ENSMUST00000120700 451 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm11229-201ENSMUST00000121993 437 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm15111-201ENSMUST00000122142 878 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm23234-201ENSMUST00000157304 134 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm4540-201ENSMUST00000170669 429 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.99□□□□□ -1.93
Hoxc4Q08624 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.99□□□□□ -1.93
Hoxc4Q08624 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.99□□□□□ -1.93
Hoxc4Q08624 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm37428-201ENSMUST00000193886 137 ntBASIC2.99□□□□□ -1.93
Hoxc4Q08624 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms