Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm23273-201ENSMUST00000104058 135 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm14771-201ENSMUST00000118249 203 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm14753-201ENSMUST00000118503 246 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm14669-201ENSMUST00000118841 250 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm14013-201ENSMUST00000119006 270 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm8217-201ENSMUST00000119136 465 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm12137-201ENSMUST00000119565 346 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm16017-201ENSMUST00000119834 208 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm11229-201ENSMUST00000121993 437 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm24914-201ENSMUST00000157285 313 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm25048-201ENSMUST00000158598 91 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm8599-201ENSMUST00000193033 457 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm10292-202ENSMUST00000193165 585 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm44402-201ENSMUST00000203677 238 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm18602-201ENSMUST00000209794 851 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm18854-201ENSMUST00000211196 329 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm23464-201ENSMUST00000083145 147 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm23941-201ENSMUST00000101953 107 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm25420-201ENSMUST00000104216 127 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm14774-201ENSMUST00000117857 536 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm7312-201ENSMUST00000118798 469 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm12686-201ENSMUST00000120546 397 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm25058-201ENSMUST00000157365 128 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22843-201ENSMUST00000157710 134 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm24439-201ENSMUST00000157894 117 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22501-201ENSMUST00000158981 127 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm15796-201ENSMUST00000162135 204 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm17528-201ENSMUST00000171026 239 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm27896-201ENSMUST00000175162 317 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22290-201ENSMUST00000177655 107 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22583-201ENSMUST00000178031 107 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22263-201ENSMUST00000180060 104 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm11395-201ENSMUST00000181011 499 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm18828-202ENSMUST00000181035 310 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm11394-201ENSMUST00000181421 517 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm22897-201ENSMUST00000197860 128 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm43393-201ENSMUST00000200147 194 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm43975-201ENSMUST00000203023 481 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm44419-201ENSMUST00000203338 229 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm19726-201ENSMUST00000205008 240 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.18□□□□□ -1.74
Col8a1Q00780 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm25792-201ENSMUST00000083289 100 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms