Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Cux1P53564 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Cux1P53564 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cux1P53564 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cux1P53564 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
Cux1P53564 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.83□□□□□ -1.8
Cux1P53564 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Cux1P53564 Gm14627-201ENSMUST00000118931 567 ntBASIC3.83□□□□□ -1.8
Cux1P53564 Gm26411-201ENSMUST00000157668 107 ntBASIC3.83□□□□□ -1.8
Cux1P53564 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cux1P53564 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.83□□□□□ -1.8
Cux1P53564 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Cux1P53564 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Cux1P53564 Gm25377-201ENSMUST00000104334 129 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm11877-201ENSMUST00000118921 852 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm23048-201ENSMUST00000157237 129 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm5268-201ENSMUST00000189212 940 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.82□□□□□ -1.8
Cux1P53564 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.82□□□□□ -1.8
Cux1P53564 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.82□□□□□ -1.8
Cux1P53564 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm18346-201ENSMUST00000216782 325 ntBASIC3.82□□□□□ -1.8
Cux1P53564 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Gm13751-201ENSMUST00000120280 752 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Gm23230-201ENSMUST00000157298 133 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Gm28923-201ENSMUST00000187755 322 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.81□□□□□ -1.8
Cux1P53564 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cux1P53564 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.81□□□□□ -1.8
Cux1P53564 Gm18871-201ENSMUST00000218655 745 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.81□□□□□ -1.8
Cux1P53564 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cux1P53564 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cux1P53564 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cux1P53564 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.81□□□□□ -1.8
Cux1P53564 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Cux1P53564 Gm5384-201ENSMUST00000120313 463 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Gm13555-201ENSMUST00000121668 319 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Gm20450-201ENSMUST00000173652 147 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.8□□□□□ -1.8
Cux1P53564 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.8□□□□□ -1.8
Cux1P53564 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.8□□□□□ -1.8
Cux1P53564 Gm18000-201ENSMUST00000212153 800 ntBASIC3.8□□□□□ -1.8
Cux1P53564 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cux1P53564 BC055308-201ENSMUST00000193380 2538 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Gm24212-201ENSMUST00000158258 132 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Mir7026-201ENSMUST00000184384 67 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.8□□□□□ -1.8
Cux1P53564 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cux1P53564 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Cux1P53564 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.8□□□□□ -1.8
Cux1P53564 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cux1P53564 Mir290a-201ENSMUST00000104627 83 ntBASIC3.79□□□□□ -1.8
Cux1P53564 Gm15074-201ENSMUST00000117603 936 ntBASIC3.79□□□□□ -1.8
Cux1P53564 Gm15536-201ENSMUST00000121411 114 ntBASIC3.79□□□□□ -1.8
Cux1P53564 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cux1P53564 Gm45105-201ENSMUST00000207824 397 ntBASIC3.79□□□□□ -1.8
Cux1P53564 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Cux1P53564 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cux1P53564 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cux1P53564 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.78□□□□□ -1.8
Cux1P53564 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cux1P53564 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cux1P53564 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.78□□□□□ -1.8
Cux1P53564 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.78□□□□□ -1.8
Cux1P53564 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.78□□□□□ -1.8
Cux1P53564 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.78□□□□□ -1.8
Cux1P53564 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cux1P53564 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cux1P53564 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cux1P53564 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cux1P53564 Gm11285-201ENSMUST00000118443 322 ntBASIC3.77□□□□□ -1.81
Cux1P53564 Gm14957-201ENSMUST00000121069 817 ntBASIC3.77□□□□□ -1.81
Cux1P53564 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cux1P53564 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Cux1P53564 Gm19257-201ENSMUST00000186121 183 ntBASIC3.77□□□□□ -1.81
Cux1P53564 Gm44521-201ENSMUST00000206469 217 ntBASIC3.77□□□□□ -1.81
Cux1P53564 Gm2676-201ENSMUST00000207279 606 ntBASIC3.77□□□□□ -1.81
Cux1P53564 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Cux1P53564 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cux1P53564 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Cux1P53564 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Cux1P53564 Gm23950-201ENSMUST00000104026 129 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Cux1P53564 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Gm8807-201ENSMUST00000179328 492 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Gm27330-201ENSMUST00000184689 132 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Gm6615-201ENSMUST00000199426 631 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Gm45072-201ENSMUST00000208673 929 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.76□□□□□ -1.81
Cux1P53564 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cux1P53564 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cux1P53564 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Cux1P53564 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.76□□□□□ -1.81
Cux1P53564 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Cux1P53564 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms