Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm26271-201ENSMUST00000158349 104 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.53□□□□□ -1.68
Ercc3P49135 Gm6625-201ENSMUST00000177870 272 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Gm29408-201ENSMUST00000187536 216 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Gm29107-201ENSMUST00000190910 347 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Gm44076-201ENSMUST00000203072 520 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.53□□□□□ -1.68
Ercc3P49135 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.53□□□□□ -1.68
Ercc3P49135 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ercc3P49135 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ercc3P49135 Gm22265-201ENSMUST00000082947 116 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Gm25404-201ENSMUST00000082970 107 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ercc3P49135 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.53□□□□□ -1.68
Ercc3P49135 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ercc3P49135 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ercc3P49135 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Ercc3P49135 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Ercc3P49135 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Ercc3P49135 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc3P49135 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Mir294-201ENSMUST00000104710 84 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Mir883a-201ENSMUST00000104824 76 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm14816-201ENSMUST00000117174 294 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm15659-201ENSMUST00000118881 341 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm7219-201ENSMUST00000119619 297 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm12096-201ENSMUST00000121149 829 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm11260-201ENSMUST00000121163 942 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm26401-201ENSMUST00000158502 76 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm18417-201ENSMUST00000176564 648 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm24968-201ENSMUST00000179817 107 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.52□□□□□ -1.69
Ercc3P49135 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm6680-201ENSMUST00000192789 950 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm37791-201ENSMUST00000195081 286 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm5983-201ENSMUST00000197739 770 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm18691-201ENSMUST00000203593 872 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm18540-201ENSMUST00000204025 526 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm44611-201ENSMUST00000207507 355 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm45162-201ENSMUST00000209013 618 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm45658-201ENSMUST00000209197 580 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Gm18597-201ENSMUST00000209519 694 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc3P49135 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc3P49135 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm31849-201ENSMUST00000220306 375 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.52□□□□□ -1.69
Ercc3P49135 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.52□□□□□ -1.69
Ercc3P49135 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc3P49135 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc3P49135 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ercc3P49135 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm23271-201ENSMUST00000104052 124 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm13607-201ENSMUST00000117875 539 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm14566-201ENSMUST00000118915 321 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm15147-201ENSMUST00000122263 483 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm16274-201ENSMUST00000139251 592 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm3102-201ENSMUST00000164236 489 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm17064-201ENSMUST00000167690 452 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm20693-201ENSMUST00000177431 211 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm5527-201ENSMUST00000179821 642 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm26960-201ENSMUST00000182263 412 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Mir7658-201ENSMUST00000184043 57 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Mir6715-201ENSMUST00000184990 57 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm3454-201ENSMUST00000185571 412 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.51□□□□□ -1.69
Ercc3P49135 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms