Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm12739-201ENSMUST00000119769 382 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm13511-201ENSMUST00000121167 363 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm23234-201ENSMUST00000157304 134 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm27592-201ENSMUST00000157729 126 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Traf1P39428 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm22174-201ENSMUST00000175050 125 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm22692-201ENSMUST00000175055 125 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm27634-201ENSMUST00000175060 126 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm22460-201ENSMUST00000175269 124 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm25535-201ENSMUST00000175364 125 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm24365-201ENSMUST00000175384 125 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm44310-201ENSMUST00000175424 126 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm22639-201ENSMUST00000175591 125 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm24979-201ENSMUST00000178626 126 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm27743-201ENSMUST00000185136 126 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm37828-201ENSMUST00000192496 432 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm43954-201ENSMUST00000204634 544 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm8423-201ENSMUST00000211387 607 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm35857-201ENSMUST00000212739 178 ntBASIC4.13□□□□□ -1.75
Traf1P39428 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.13□□□□□ -1.75
Traf1P39428 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.13□□□□□ -1.75
Traf1P39428 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Traf1P39428 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.13□□□□□ -1.75
Traf1P39428 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.13□□□□□ -1.75
Traf1P39428 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.13□□□□□ -1.75
Traf1P39428 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.13□□□□□ -1.75
Traf1P39428 AC156574.2-201ENSMUST00000228023 282 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Gm10161-201ENSMUST00000091506 204 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Traf1P39428 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Traf1P39428 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm14880-201ENSMUST00000117581 292 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm4732-201ENSMUST00000118778 473 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm14913-201ENSMUST00000120011 1093 ntBASIC4.12□□□□□ -1.75
Traf1P39428 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Traf1P39428 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.12□□□□□ -1.75
Traf1P39428 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm28148-201ENSMUST00000186924 697 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm5829-201ENSMUST00000191383 351 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm6680-201ENSMUST00000192789 950 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm38213-201ENSMUST00000193203 173 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm43407-201ENSMUST00000199816 317 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.12□□□□□ -1.75
Traf1P39428 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Traf1P39428 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.12□□□□□ -1.75
Traf1P39428 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Traf1P39428 Gm336-201ENSMUST00000186376 1480 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 Gm15125-201ENSMUST00000116185 800 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm24831-201ENSMUST00000116778 126 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm13731-201ENSMUST00000117332 196 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm15244-201ENSMUST00000121122 130 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm42832-201ENSMUST00000196361 745 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.11□□□□□ -1.75
Traf1P39428 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.11□□□□□ -1.75
Traf1P39428 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Gm2710-201ENSMUST00000073196 603 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Traf1P39428 Mir101b-201ENSMUST00000083622 97 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Gm25630-201ENSMUST00000084000 162 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Traf1P39428 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Traf1P39428 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Traf1P39428 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.11□□□□□ -1.75
Traf1P39428 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Traf1P39428 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Traf1P39428 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Traf1P39428 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Traf1P39428 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms