Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Gm24166-201ENSMUST00000082724 135 ntBASIC5.3□□□□□ -1.56
RaraP11416 Mir134-201ENSMUST00000083492 71 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm5670-201ENSMUST00000093546 372 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.3□□□□□ -1.56
RaraP11416 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.3□□□□□ -1.56
RaraP11416 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.3□□□□□ -1.56
RaraP11416 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.29□□□□□ -1.56
RaraP11416 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RaraP11416 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.29□□□□□ -1.56
RaraP11416 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RaraP11416 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RaraP11416 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RaraP11416 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RaraP11416 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
RaraP11416 Gm23578-201ENSMUST00000103943 104 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm23746-201ENSMUST00000104229 125 ntBASIC5.29□□□□□ -1.56
RaraP11416 Mir466h-201ENSMUST00000104748 81 ntBASIC5.29□□□□□ -1.56
RaraP11416 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RaraP11416 Gm24640-201ENSMUST00000116949 126 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm22626-201ENSMUST00000116990 126 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm11790-201ENSMUST00000119569 455 ntBASIC5.29□□□□□ -1.56
RaraP11416 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.29□□□□□ -1.56
RaraP11416 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RaraP11416 Gm23704-201ENSMUST00000158844 340 ntBASIC5.29□□□□□ -1.56
RaraP11416 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RaraP11416 Gm23725-201ENSMUST00000177876 107 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm24761-201ENSMUST00000179589 127 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm24488-201ENSMUST00000179934 127 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm25701-201ENSMUST00000179988 127 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm26431-201ENSMUST00000180199 127 ntBASIC5.29□□□□□ -1.56
RaraP11416 Mir7687-201ENSMUST00000184722 59 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Gm29147-201ENSMUST00000186846 315 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm2497-201ENSMUST00000189539 601 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm28744-201ENSMUST00000189939 340 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm28160-201ENSMUST00000191229 315 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm37338-201ENSMUST00000191986 127 ntBASIC5.29□□□□□ -1.56
RaraP11416 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.29□□□□□ -1.56
RaraP11416 Gm45005-201ENSMUST00000206640 157 ntBASIC5.29□□□□□ -1.56
RaraP11416 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.29□□□□□ -1.56
RaraP11416 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Olfr151-202ENSMUST00000221099 929 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm9269-201ENSMUST00000221661 578 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm24457-201ENSMUST00000083196 105 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm26164-201ENSMUST00000083793 104 ntBASIC5.29□□□□□ -1.56
RaraP11416 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RaraP11416 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.29□□□□□ -1.56
RaraP11416 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.28□□□□□ -1.56
RaraP11416 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RaraP11416 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
RaraP11416 Gm25919-201ENSMUST00000104271 132 ntBASIC5.28□□□□□ -1.56
RaraP11416 Snord98-201ENSMUST00000116819 65 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm14774-201ENSMUST00000117857 536 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm11196-201ENSMUST00000119052 395 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm11481-201ENSMUST00000120069 255 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.28□□□□□ -1.56
RaraP11416 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm11909-201ENSMUST00000121424 759 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm13214-201ENSMUST00000122137 408 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm22958-201ENSMUST00000122512 184 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.28□□□□□ -1.56
RaraP11416 Gm24914-201ENSMUST00000157285 313 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.28□□□□□ -1.56
RaraP11416 Gm8580-201ENSMUST00000160295 464 ntBASIC5.28□□□□□ -1.56
RaraP11416 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Gm26400-201ENSMUST00000175012 85 ntBASIC5.28□□□□□ -1.56
RaraP11416 Mir6355-201ENSMUST00000183687 106 ntBASIC5.28□□□□□ -1.56
RaraP11416 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
RaraP11416 Gm28860-201ENSMUST00000188103 313 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm28957-201ENSMUST00000190174 373 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm28769-201ENSMUST00000190176 615 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm37128-201ENSMUST00000192599 232 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm42570-201ENSMUST00000195937 292 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.28□□□□□ -1.56
RaraP11416 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm45678-201ENSMUST00000210509 295 ntBASIC5.28□□□□□ -1.56
RaraP11416 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RaraP11416 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Gm6056-201ENSMUST00000221253 488 ntBASIC5.28□□□□□ -1.56
RaraP11416 Gm7040-201ENSMUST00000223271 443 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms