Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm25835-201ENSMUST00000158917 144 ntBASIC3.1□□□□□ -1.91
P06344 Gm5277-201ENSMUST00000164923 556 ntBASIC3.1□□□□□ -1.91
P06344 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
P06344 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
P06344 Gm25748-201ENSMUST00000175487 70 ntBASIC3.1□□□□□ -1.91
P06344 Gm27733-201ENSMUST00000184803 68 ntBASIC3.1□□□□□ -1.91
P06344 Gm18505-201ENSMUST00000187360 790 ntBASIC3.1□□□□□ -1.91
P06344 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.1□□□□□ -1.91
P06344 Gm43096-201ENSMUST00000196173 421 ntBASIC3.1□□□□□ -1.91
P06344 Gm42850-201ENSMUST00000202094 201 ntBASIC3.1□□□□□ -1.91
P06344 Gm45530-201ENSMUST00000211658 225 ntBASIC3.1□□□□□ -1.91
P06344 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.1□□□□□ -1.91
P06344 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
P06344 Gm8249-201ENSMUST00000219225 465 ntBASIC3.1□□□□□ -1.91
P06344 Gm8274-201ENSMUST00000219820 463 ntBASIC3.1□□□□□ -1.91
P06344 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.1□□□□□ -1.91
P06344 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.1□□□□□ -1.91
P06344 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.1□□□□□ -1.91
P06344 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
P06344 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.1□□□□□ -1.91
P06344 Gm2710-201ENSMUST00000073196 603 ntBASIC3.1□□□□□ -1.91
P06344 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
P06344 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
P06344 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.1□□□□□ -1.91
P06344 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.1□□□□□ -1.91
P06344 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
P06344 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
P06344 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
P06344 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P06344 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.09□□□□□ -1.91
P06344 Gm26377-201ENSMUST00000102184 108 ntBASIC3.09□□□□□ -1.91
P06344 Gm13731-201ENSMUST00000117332 196 ntBASIC3.09□□□□□ -1.91
P06344 Gm14890-201ENSMUST00000117660 676 ntBASIC3.09□□□□□ -1.91
P06344 Gm12509-201ENSMUST00000118033 609 ntBASIC3.09□□□□□ -1.91
P06344 Gm12722-201ENSMUST00000118507 493 ntBASIC3.09□□□□□ -1.91
P06344 Gm14810-201ENSMUST00000121628 486 ntBASIC3.09□□□□□ -1.91
P06344 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
P06344 Gm23326-201ENSMUST00000157419 105 ntBASIC3.09□□□□□ -1.91
P06344 Gm24060-201ENSMUST00000157494 95 ntBASIC3.09□□□□□ -1.91
P06344 Gm25438-201ENSMUST00000158281 110 ntBASIC3.09□□□□□ -1.91
P06344 Gm25519-201ENSMUST00000158392 127 ntBASIC3.09□□□□□ -1.91
P06344 Gm23775-201ENSMUST00000158991 249 ntBASIC3.09□□□□□ -1.91
P06344 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.09□□□□□ -1.91
P06344 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Gm7094-201ENSMUST00000178379 366 ntBASIC3.09□□□□□ -1.91
P06344 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.09□□□□□ -1.91
P06344 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.09□□□□□ -1.91
P06344 Gm29365-201ENSMUST00000189461 699 ntBASIC3.09□□□□□ -1.91
P06344 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.09□□□□□ -1.91
P06344 Gm45420-201ENSMUST00000211243 425 ntBASIC3.09□□□□□ -1.91
P06344 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.09□□□□□ -1.91
P06344 Gm9628-201ENSMUST00000222169 725 ntBASIC3.09□□□□□ -1.91
P06344 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.09□□□□□ -1.91
P06344 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.09□□□□□ -1.91
P06344 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.09□□□□□ -1.91
P06344 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P06344 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.09□□□□□ -1.91
P06344 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
P06344 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P06344 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.09□□□□□ -1.91
P06344 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.09□□□□□ -1.92
P06344 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
P06344 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
P06344 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
P06344 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.08□□□□□ -1.92
P06344 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.08□□□□□ -1.92
P06344 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.08□□□□□ -1.92
P06344 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
P06344 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
P06344 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
P06344 Gm23530-201ENSMUST00000104564 137 ntBASIC3.08□□□□□ -1.92
P06344 Gm25560-201ENSMUST00000104606 176 ntBASIC3.08□□□□□ -1.92
P06344 Gm14811-201ENSMUST00000117070 117 ntBASIC3.08□□□□□ -1.92
P06344 Gm7974-201ENSMUST00000117154 408 ntBASIC3.08□□□□□ -1.92
P06344 Gm12982-201ENSMUST00000117408 190 ntBASIC3.08□□□□□ -1.92
P06344 Gm12276-201ENSMUST00000121709 301 ntBASIC3.08□□□□□ -1.92
P06344 Gm12998-201ENSMUST00000122445 789 ntBASIC3.08□□□□□ -1.92
P06344 Gm25967-201ENSMUST00000157168 147 ntBASIC3.08□□□□□ -1.92
P06344 Gm23667-201ENSMUST00000157466 120 ntBASIC3.08□□□□□ -1.92
P06344 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.08□□□□□ -1.92
P06344 Mir6914-201ENSMUST00000184999 69 ntBASIC3.08□□□□□ -1.92
P06344 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.08□□□□□ -1.92
P06344 Gm29389-201ENSMUST00000191562 352 ntBASIC3.08□□□□□ -1.92
P06344 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.08□□□□□ -1.92
P06344 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.08□□□□□ -1.92
P06344 Gm43070-201ENSMUST00000196938 415 ntBASIC3.08□□□□□ -1.92
P06344 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.08□□□□□ -1.92
P06344 Gm43975-201ENSMUST00000203023 481 ntBASIC3.08□□□□□ -1.92
P06344 Gm45814-201ENSMUST00000212646 775 ntBASIC3.08□□□□□ -1.92
P06344 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.08□□□□□ -1.92
P06344 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.08□□□□□ -1.92
P06344 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.08□□□□□ -1.92
P06344 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.08□□□□□ -1.92
P06344 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms