Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26406-201ENSMUST00000158503 124 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm23053-201ENSMUST00000175136 96 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm20651-201ENSMUST00000177219 329 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Mir6386-201ENSMUST00000183558 104 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm28744-201ENSMUST00000189939 340 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm37281-201ENSMUST00000192412 439 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm44084-201ENSMUST00000203947 409 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm7786-201ENSMUST00000210494 436 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm25169-201ENSMUST00000104190 129 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm15231-201ENSMUST00000119174 447 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm25295-201ENSMUST00000122794 306 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb3O54879 Mir5123-201ENSMUST00000177794 83 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm6615-201ENSMUST00000199426 631 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm44600-201ENSMUST00000208540 111 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm34779-201ENSMUST00000210036 263 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.31□□□□□ -2.04
Hmgb3O54879 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm23736-201ENSMUST00000082553 75 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm10161-201ENSMUST00000091506 204 ntBASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb3O54879 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.31□□□□□ -2.04
Hmgb3O54879 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm23577-201ENSMUST00000103950 110 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm11285-201ENSMUST00000118443 322 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm16458-201ENSMUST00000121428 502 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm22416-201ENSMUST00000158590 88 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm25119-201ENSMUST00000158815 88 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm8338-201ENSMUST00000163928 363 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm24520-201ENSMUST00000179510 110 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm6012-201ENSMUST00000210821 730 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm7380-201ENSMUST00000211599 466 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgb3O54879 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.3□□□□□ -2.04
Hmgb3O54879 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm6776-201ENSMUST00000057752 900 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgb3O54879 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgb3O54879 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.3□□□□□ -2.04
Hmgb3O54879 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Hmgb3O54879 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.29□□□□□ -2.04
Hmgb3O54879 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Hmgb3O54879 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm24951-201ENSMUST00000102182 109 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Hmgb3O54879 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm26473-201ENSMUST00000116763 127 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm13076-201ENSMUST00000118041 204 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm14982-201ENSMUST00000121102 442 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm14383-201ENSMUST00000121637 386 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm23886-201ENSMUST00000122684 313 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm22330-201ENSMUST00000158068 115 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Gm22839-201ENSMUST00000158436 304 ntBASIC2.29□□□□□ -2.04
Hmgb3O54879 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms