Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Gm24626-201ENSMUST00000082621 161 ntBASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Gm25481-201ENSMUST00000083221 158 ntBASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Gm25126-201ENSMUST00000083343 102 ntBASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Pcdh9F8VPK8 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm24125-201ENSMUST00000104105 137 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm25507-201ENSMUST00000116981 144 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm13650-201ENSMUST00000117729 433 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm14835-201ENSMUST00000119039 315 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm11352-201ENSMUST00000119264 517 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm13973-201ENSMUST00000121371 894 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm6568-201ENSMUST00000122274 697 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm22613-201ENSMUST00000122679 292 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm22765-201ENSMUST00000158371 128 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm24503-201ENSMUST00000158454 135 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm22076-201ENSMUST00000158601 84 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm8224-201ENSMUST00000166178 497 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm23186-201ENSMUST00000180078 107 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm28343-201ENSMUST00000185386 112 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm28414-201ENSMUST00000190111 294 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm18296-201ENSMUST00000192475 783 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm24622-201ENSMUST00000082619 162 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm24950-201ENSMUST00000082768 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm23939-201ENSMUST00000082880 133 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm23443-201ENSMUST00000082916 128 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm23971-201ENSMUST00000083317 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm23849-201ENSMUST00000083833 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm26316-201ENSMUST00000083886 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm26108-201ENSMUST00000083973 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Pcdh9F8VPK8 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh9F8VPK8 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.9□□□□□ -1.78
Pcdh9F8VPK8 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Pcdh9F8VPK8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm22493-201ENSMUST00000104494 132 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm14890-201ENSMUST00000117660 676 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm11219-201ENSMUST00000118565 358 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm14793-201ENSMUST00000118739 311 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm25559-201ENSMUST00000157182 74 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm23123-201ENSMUST00000157648 144 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm25334-201ENSMUST00000158036 110 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm24727-201ENSMUST00000158231 144 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm27317-201ENSMUST00000183533 95 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm8023-201ENSMUST00000195298 903 ntBASIC3.9□□□□□ -1.79
Pcdh9F8VPK8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms