Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC142499.1-201ENSMUST00000220036 374 ntBASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 AC108416.2-201ENSMUST00000226792 367 ntBASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4□□□□□ -1.77
Pcdhb9E9Q5G2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Mir673-201ENSMUST00000102361 91 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Mir582-201ENSMUST00000103758 81 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm6429-201ENSMUST00000117144 475 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm13603-201ENSMUST00000119404 83 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm15142-201ENSMUST00000121013 856 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm23957-201ENSMUST00000157209 90 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm24289-201ENSMUST00000157629 135 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm23385-201ENSMUST00000158592 295 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm27659-201ENSMUST00000183472 98 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm29038-201ENSMUST00000191543 678 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm35212-201ENSMUST00000196672 606 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm43142-201ENSMUST00000198670 361 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm42758-201ENSMUST00000202146 283 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm44016-201ENSMUST00000203463 164 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm7726-201ENSMUST00000206241 231 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Mir193a-201ENSMUST00000083461 66 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm22115-201ENSMUST00000103976 133 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm23923-201ENSMUST00000104108 133 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm24127-201ENSMUST00000104110 130 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm23532-201ENSMUST00000104569 112 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm14541-201ENSMUST00000118985 157 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm12897-201ENSMUST00000120341 250 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm26028-201ENSMUST00000158660 294 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm18667-201ENSMUST00000186523 484 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm29452-201ENSMUST00000187996 313 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm28860-201ENSMUST00000188103 313 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm20162-201ENSMUST00000193629 871 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm36776-201ENSMUST00000207006 203 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm45912-201ENSMUST00000210646 543 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm9628-201ENSMUST00000222169 725 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm23447-201ENSMUST00000082798 163 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm24928-201ENSMUST00000083399 107 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Mir421-201ENSMUST00000083575 76 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm25897-201ENSMUST00000083709 107 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.98□□□□□ -1.77
Pcdhb9E9Q5G2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.97□□□□□ -1.77
Pcdhb9E9Q5G2 Gm14591-201ENSMUST00000120407 518 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms