Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Mir1198-201ENSMUST00000116995 121 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13614-201ENSMUST00000117306 503 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14753-201ENSMUST00000118503 246 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13082-201ENSMUST00000118877 561 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12213-201ENSMUST00000119924 353 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12884-201ENSMUST00000120371 325 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22480-201ENSMUST00000122568 128 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22034-201ENSMUST00000157283 134 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23228-201ENSMUST00000157296 270 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22225-201ENSMUST00000157358 278 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22816-201ENSMUST00000157450 117 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22120-201ENSMUST00000175590 70 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22307-201ENSMUST00000180019 107 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28011-201ENSMUST00000184097 175 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Ighv10-4-201ENSMUST00000193702 299 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7449-201ENSMUST00000194393 663 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm17951-201ENSMUST00000198536 496 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45105-201ENSMUST00000207824 397 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm4921-201ENSMUST00000219804 992 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm19540-201ENSMUST00000221843 810 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23939-201ENSMUST00000082880 133 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22269-201ENSMUST00000104002 130 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13329-201ENSMUST00000117063 265 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm16431-201ENSMUST00000117454 431 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12722-201ENSMUST00000118507 493 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14463-201ENSMUST00000121117 498 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm9001-201ENSMUST00000121642 399 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23775-201ENSMUST00000158991 249 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm20612-201ENSMUST00000176318 236 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm25120-201ENSMUST00000180148 79 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm27189-201ENSMUST00000184119 190 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28069-201ENSMUST00000189926 214 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm5551-201ENSMUST00000199720 690 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43967-201ENSMUST00000203787 301 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44520-201ENSMUST00000205447 802 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44720-201ENSMUST00000206076 260 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45379-201ENSMUST00000211772 549 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm18338-201ENSMUST00000222381 560 ntBASIC2.3□□□□□ -2.04
Trav11A0A0B4J1J9 Gm19786-201ENSMUST00000222589 580 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms