Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm23577-201ENSMUST00000103950 110 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm15180-201ENSMUST00000117745 492 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm11869-201ENSMUST00000118701 329 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm6664-201ENSMUST00000119138 468 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm13155-201ENSMUST00000119277 646 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm15452-201ENSMUST00000119877 240 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm13239-201ENSMUST00000119920 637 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm12873-201ENSMUST00000119988 422 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm15263-201ENSMUST00000121556 642 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm8178-201ENSMUST00000121570 646 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Mir7028-201ENSMUST00000185016 64 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm29045-201ENSMUST00000187278 698 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm38075-201ENSMUST00000191979 920 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm5317-201ENSMUST00000204445 847 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm35857-201ENSMUST00000212739 178 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm24622-201ENSMUST00000082619 162 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm26128-201ENSMUST00000083170 110 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm13228-201ENSMUST00000118937 634 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm14656-201ENSMUST00000120342 502 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm12706-201ENSMUST00000121588 698 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm6395-201ENSMUST00000167639 691 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm27999-201ENSMUST00000183539 193 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm27599-201ENSMUST00000183758 174 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm8600-201ENSMUST00000186320 905 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm35931-201ENSMUST00000203931 448 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm29754-201ENSMUST00000206269 358 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm44887-201ENSMUST00000208980 178 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm45439-201ENSMUST00000211723 359 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Mir465-201ENSMUST00000093563 74 ntBASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm26387-201ENSMUST00000104238 132 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm14981-201ENSMUST00000117325 943 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm11490-201ENSMUST00000118128 272 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm5943-201ENSMUST00000119458 459 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm15719-201ENSMUST00000120619 635 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm22480-201ENSMUST00000122568 128 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm24059-201ENSMUST00000157493 312 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm23257-201ENSMUST00000158322 132 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm23112-201ENSMUST00000158606 125 ntBASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trbv12-1A0A0B4J1H0 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms