Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb3S4R1G7 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm22473-201ENSMUST00000104114 132 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Mir669i-201ENSMUST00000117007 127 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm14890-201ENSMUST00000117660 676 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm11854-201ENSMUST00000117839 446 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm15206-201ENSMUST00000119143 454 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm11830-201ENSMUST00000120175 561 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm14875-201ENSMUST00000120881 319 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm16428-201ENSMUST00000121193 723 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm13092-201ENSMUST00000136346 260 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm25335-201ENSMUST00000158043 103 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm25520-201ENSMUST00000158389 118 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm2389-201ENSMUST00000160487 189 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm17086-201ENSMUST00000171346 484 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm22177-201ENSMUST00000175002 158 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm23144-201ENSMUST00000180226 107 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm37658-201ENSMUST00000192672 315 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm43975-201ENSMUST00000203023 481 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm44184-201ENSMUST00000204290 132 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm44765-201ENSMUST00000206927 601 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm45727-201ENSMUST00000212886 572 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm9068-201ENSMUST00000217393 455 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm9616-201ENSMUST00000221154 781 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm25800-201ENSMUST00000082636 134 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm23456-201ENSMUST00000083335 137 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb3S4R1G7 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Synpr-207ENSMUST00000223583 3362 ntBASIC3.85□□□□□ -1.79
H2afb3S4R1G7 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm24117-201ENSMUST00000103973 133 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm22656-201ENSMUST00000104199 171 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm15180-201ENSMUST00000117745 492 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm11673-201ENSMUST00000117846 331 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm12515-201ENSMUST00000120116 361 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm14977-201ENSMUST00000121626 812 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm23206-201ENSMUST00000122720 184 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm23538-201ENSMUST00000157535 101 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm17538-201ENSMUST00000168236 327 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm23638-201ENSMUST00000175073 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm23158-201ENSMUST00000175076 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm22907-201ENSMUST00000175198 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm22625-201ENSMUST00000175382 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm22875-201ENSMUST00000175449 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm25197-201ENSMUST00000175516 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm27857-201ENSMUST00000176930 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm26268-201ENSMUST00000177685 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm23681-201ENSMUST00000178821 126 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm27940-201ENSMUST00000184449 98 ntBASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.84□□□□□ -1.79
H2afb3S4R1G7 Gm9722-201ENSMUST00000194568 802 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms