Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22657-201ENSMUST00000104197 132 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm14299-201ENSMUST00000117586 397 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm14607-201ENSMUST00000119119 491 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm14731-201ENSMUST00000119216 376 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm11600-201ENSMUST00000119592 240 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm12691-201ENSMUST00000120186 456 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm12543-201ENSMUST00000120410 543 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm22211-201ENSMUST00000158097 156 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm16569-201ENSMUST00000160526 314 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm19203-201ENSMUST00000174049 939 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm22395-201ENSMUST00000177427 96 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Mir6345-201ENSMUST00000184286 128 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm27611-201ENSMUST00000184690 108 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm27308-201ENSMUST00000184807 233 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm29263-201ENSMUST00000188718 463 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm44254-201ENSMUST00000204184 322 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm44092-201ENSMUST00000204470 258 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm45530-201ENSMUST00000211658 225 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm7099-201ENSMUST00000080066 554 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm26439-201ENSMUST00000082592 106 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm24626-201ENSMUST00000082621 161 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm22272-201ENSMUST00000104039 134 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm12393-201ENSMUST00000117084 848 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm13064-201ENSMUST00000119125 557 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm14282-201ENSMUST00000119484 240 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm16017-201ENSMUST00000119834 208 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm11830-201ENSMUST00000120175 561 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm16331-201ENSMUST00000144274 498 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm23716-201ENSMUST00000157348 144 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Mir1251-201ENSMUST00000175486 84 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm28141-201ENSMUST00000186676 342 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm37845-201ENSMUST00000194977 355 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm44583-201ENSMUST00000207478 281 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm18194-201ENSMUST00000210455 481 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
H2afb1S4R1E0 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Mir291a-201ENSMUST00000104815 82 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm7974-201ENSMUST00000117154 408 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm6584-201ENSMUST00000119671 447 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm13720-201ENSMUST00000120741 196 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm12900-201ENSMUST00000120919 573 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Snrpert-201ENSMUST00000121967 279 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm26393-201ENSMUST00000157625 129 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm24537-201ENSMUST00000157950 102 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm22889-201ENSMUST00000158639 58 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm7346-201ENSMUST00000169661 476 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Snord92-201ENSMUST00000175548 85 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms